Vigna umbellata (ricebean): 124826571
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Entry
124826571 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
vum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124826571
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124826571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124826571
Transcription factors [BR:
vum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124826571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
124826571
NCBI-ProteinID:
XP_047155370
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MPLYELYRLAREKLGTENNSTRASDQCSSPENDFFELVWENGQISSQGQSSKVRRSPSCK
SLPSHCLPSHSPKGRDKDVGYGANWIGKFRDLDSGLNEISMSVPSREVDFCQDEDVLPWF
DYPTMDSSLQHDYDSDFLPAPTSFTLSDKKSNSRMALRDSHKTSEEQGNAFKDSSAEQVG
TVEPKASTNQLYPPSLHHCQTSFVSSRSRTSDITENNNTSNANQDATYGEITNFLSSSSD
FSSPKGKKQEPPLPGNGSSSTIMNFSHFARPAAKVRANLQNIGLKSGLSSARSDSMEIKN
KDAAATSSNPPESIVIDSSGECPKELTIHCQQNVDQSKTDLNTSLSKAVEQNAILSKQSE
TACNESSTKIDQIADQVLGDSGAKGQTTAENSMEAAVASSSVCSGNGADRGSDEPNKNLK
RKRKDTDDSECHSEKTFYMKDAEEESAGVKKASGGRGGTGSKRTRAAEVHNLSERRRRDR
INEKMRALQELIPNCNKVDKASMLDEAIXYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQH
MHAPHMAPFSPMGVGMHMGYGMGYGVGMPDMNGGSSRFPMIQVPQMQGNHIPVAQMSGPT
ALHEMAGSNLPRLGLPGQVHPMPMPRAPMLPFSGGPVMNSSALGLHACGLSGLVETVDTA
SASGLKDQMPNVGPLVKQSTGGRDSTSQMPTQSETAVVGFEQSAMVHNSGHTSGANDNGA
LNPCPSR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtacgagttataccgtctggccagagaaaagcttggtacagagaataacagc
acacgtgcatctgatcaatgttcctcacctgagaatgatttttttgagctagtttgggag
aatggtcagatttctagccagggtcagtctagtaaagttagaaggagcccatcttgcaag
agtttgccatctcactgcttaccatctcacagtcccaagggtagagacaaagatgtagga
tatggtgccaactggattggaaaatttagagatttagactctggattgaatgaaatttca
atgtcggtgccgtcccgtgaagttgatttctgtcaagacgaagatgtgttaccttggttt
gattacccaacaatggatagttccttgcaacatgactatgattctgatttcctccctgcc
ccaactagctttactctatcggataaaaaaagtaatagcaggatggctttgagggattct
cataaaacttctgaagaacaagggaatgctttcaaggattcttcagctgagcaggttgga
actgtcgagcccaaagctagcaccaatcagttataccctccatcattgcatcattgtcaa
acatcttttgtatcttcaagatccagaacatcagatataactgaaaataacaatactagt
aatgcaaaccaggatgccacctatggcgaaattaccaattttctatcttcctcaagtgat
ttttctagcccaaaggggaagaagcaagagccacctctgcctggcaatggttccagttcc
accataatgaatttctcccattttgctaggcctgcggcaaaggtaagagctaatcttcag
aacattggcttgaagtctggtttgtcttcagcaagatcagacagtatggaaattaagaat
aaagatgcagctgcaactagcagcaatcctcctgaatcaattgttattgattcaagtggt
gaatgtccgaaggaactgactattcactgtcagcagaatgtggatcaatccaagacagat
ttgaatacttcactgtcgaaagctgttgaacagaatgccattctttctaagcagtcagag
actgcttgtaatgagagttccactaagattgaccaaattgctgatcaagttcttggtgac
agtggtgctaaagggcagacaactgctgaaaatagtatggaggcagcagtagcctcttcc
tctgtttgctctggcaatggtgctgatagaggttcagatgagccaaataaaaatttgaag
cgaaaaagaaaagacaccgatgattctgagtgccacagtgaaaagacattttacatgaag
gatgctgaagaagaatcagcgggtgttaaaaaggcatctggagggcgtggaggtacaggt
tccaagagaacccgtgcagctgaagtgcataacctatctgaaaggaggcgaagggacaga
atcaacgagaagatgcgtgcgttgcaagaactcattccaaattgcaataaggtggataaa
gcctcaatgctagacgaggcaatctagtatcttaaaacacttcagctccaagttcaaatt
atgtcaatgggagctggtttatatatgcctccaatgatgttacctgcaggaatgcagcac
atgcatgcaccacatatggctccattttcacctatgggtgttggcatgcatatgggatat
ggtatgggttatggggtgggaatgcccgacatgaatggtggatcttcaagattccctatg
attcaggtgccccagatgcaaggaaatcatatccctgtcgcccaaatgtctggacctact
gctttacatgagatggccggatcaaatcttccaaggctcgggcttcctggacaagtacat
cccatgccaatgcctcgagctcccatgctgccgttttctggaggacctgtcatgaactca
tcagctctgggactacatgcttgtggattgtcaggacttgttgaaaccgtggatacagct
tctgcatctggcttaaaggatcaaatgccaaacgttggcccactagttaagcaaagcact
ggtggccgtgactcaacaagtcagatgcctacacagagtgaaacagctgttgttggattt
gagcaatctgctatggttcataacagcggtcatacctctggggctaatgacaatggagct
cttaatccttgtcccagcagataa
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