KEGG   Vigna umbellata (ricebean): 124827483
Entry
124827483         CDS       T09662                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124827483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vum03021]
    124827483
Enzymes [BR:vum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124827483
Transcription machinery [BR:vum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124827483
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 124827483
NCBI-ProteinID: XP_047156503
LinkDB
Position
Unknown
AA seq 1198 aa
MFLFLEMQLNPDKTPNTIFADIQKKKVAENACNSSGLRWIKDVVLGKRNDSTFRAVVVGD
PYLELSEIGIPCHIAESLHVSEYVNRQNLEKLLYCCELRLLEKGAIKVCRKGSSINLFKK
EDLRIGDQFYRPLCDGDKVLINRPPSIHQHSMIALTVRVLPISSVVCINPLCCSPFRGDF
DGDCLHGYIPQSVSARVELNELVALDRQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLD
VYQMQQLQMLCNKGLPPPGIVKAPSSKSSFWSGKQLFSMLLPSDFGYSFSSDGVVVSDGE
LLSSFEASGWLRDSDCNVFQSLVEHFQGKSLNFLFAAQNVLCEWLSMIGFSVSLSDLYLS
SDSYARKNMIEEIFYGLQDAEKACDFKQLLLDCYCDFLSGNHEESENSMIVDADNLNNER
QISAALSQASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQ
NSLVRLSYRLPRHLSCSAWNSEKGLDSIQKYSGTLKSVQSYIPCAVVKSSFLTGLNPLEC
FVHSVATRASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIEENS
SCDQSLKEYAIGGEPVGALSASAVSEAGYSALDQPVSLLETSPLLNLKNVLECGSRKKKG
DQSVTLFLSEKVGKQRHGFEYAALEVKNYLERLFFSKIVSTVMIIFTPHDSRSLEKGCPW
VCHFHLDKEILTRRNLKVDSIIDSLYQRYYSQRKELKVSFTNLKISSNRKCSGYSAVKEG
DDTFVDNKEDSDDCITVTVVENSENPIQLVSVRDLMIPFFLGTTVKGFMDIKKVDILWNN
QSKVTNSYSGSSGELYLRVTVASDGNTGRFWGVLVNHCHKIMQIIDWPRSHPDSISYISS
AFGIDVAWQYYYKSLASAICDTGKSILPKHLRLLANSLSASGEFVGLNAKGMALQREHAS
VSSPFVQACFSNPGRSFIKAAKSGITDNLRGSLDALAWGNCPSLGTSGLFDIIYSEKGYE
VAKSVDVYKLLEASFDKPNNKIGIYSHNNSSDKCGSEFRHKNGYAFKEGKQWKNIVRNFV
TVNDIQKLTIASRCILNKYAIDELISEFDRSTMLRVLNFHPRRSEKLGIGPQDIKVGWHP
KFTDSRCFHIVRTDGTVEDFSYRKCILGALEIVDPKMSKIQKKKWSGRDDTNSMRVQA
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgtttttgtttttggaaatgcagctaaatcctgataaaacacctaatactatttttgct
gatatccaaaagaaaaaagttgcagaaaatgcttgcaattcttctggtttaagatggata
aaagatgtggttcttggaaaacgcaatgatagtacgttccgtgccgttgttgttggtgat
ccataccttgagctcagtgaaattggtataccttgccatattgctgaaagtttgcacgtt
tctgagtatgttaacaggcagaatttggaaaagctgctttattgttgtgagctacgcctg
ttagagaagggagcgataaaggtttgcagaaagggtagttctattaatctgtttaaaaag
gaagatctacggataggagaccaattttataggcctctttgtgatggggataaggttctg
ataaataggcccccttccatacatcaacattctatgattgctctcactgttagggtcctt
ccaatatcttctgtagtgtgcattaacccactttgttgttccccatttcgtggggatttt
gatggtgattgccttcacgggtatattccacaatcagttagtgcaagagttgagcttaat
gagcttgttgctttagataggcaattgtttaatgggcaaagtggtagaaatctgctttca
ctttcggaggatagtttgactgctgcatatttgctaatggaagatggggtccttttagat
gtttaccagatgcagcagcttcaaatgctttgtaacaaaggtttacctcctcctggaatt
gtaaaagctccttcaagcaaaagctcattttggagtggcaagcaattgtttagcatgctc
ttgccttctgattttggatattccttttcttcggatggtgttgttgttagtgatggggag
cttttatcttcttttgaggcttctggatggttacgtgattctgactgcaatgttttccag
agtcttgtggaacattttcaagggaaatctctaaactttttgtttgctgcgcagaatgtt
ttatgtgaatggttatctatgattggttttagtgtttcactctcagatttgtacctctct
tctgattcctatgcacgaaaaaacatgattgaggaaatattttatggtttacaagatgca
gagaaggcatgtgatttcaagcagttattgttggattgctattgtgattttttgtctgga
aatcatgaagagagtgaaaattctatgattgttgatgcagacaatctgaataatgaaaga
caaatatctgctgctctcagtcaagcatcagttgatgcttttaggcatgtttttcgcaat
attcaaagtttagctgacaaatatgcatgtacagacaatacttttcttgccatgaataag
gctggaagcaagagtagtttagtgagattagcgcaacattccatgtgccttggcatgcaa
aattctctggtccgcttatcttacagactaccccgtcatctttcatgttctgcttggaat
agtgaaaaggggcttgattcaatccagaaatactctggtacccttaaatctgttcagtct
tacattccgtgtgctgtggtcaaaagctcatttctgactgggttgaatccacttgaatgt
tttgttcattctgtggcaacccgtgctagtggtttcagtgaaaatgcagacgttcctgga
acattaacacggagattgatgttcttcatgcgtgatctgtttgctgcatatgatggaaca
gtgagaaatttatatggtaatcaacttattcagttttcttatgatattgaagagaactct
tcatgtgatcaaagtttaaaagagtatgctattggtggtgaaccagttggggcactttct
gcttctgcagtttcagaagctggatacagtgctttggatcaaccagttagtctacttgaa
acgtcacctttgctgaatttgaaaaatgttcttgaatgcggttcaaggaaaaaaaagggc
gaccagtctgtgactttatttttgtctgaaaaagttggtaaacagagacatgggtttgaa
tatgcagctttagaagttaagaattatttggaaagattgttcttctcaaaaattgtttct
actgtgatgataatattcaccccacatgatagccgcagcctagagaaaggctgtccttgg
gtctgccactttcatttagacaaggaaattctaacgagaagaaatttgaaagtggattct
atcattgactctctttaccagagatattactcccagagaaaagaactaaaagtctctttt
accaacttgaaaatatcaagcaacagaaagtgttctggttattcagcggttaaggaaggt
gatgacacttttgtagataataaagaagacagtgatgattgcattacggtcacagttgtt
gaaaattctgagaatcctatccaactggtttccgttcgggacttgatgataccttttttt
ctaggaacaacagtaaaaggatttatggacatcaagaaggttgatattctctggaataat
caatcaaaagtaacaaattcttacagtggttcttctggtgaactgtacttgagggttact
gtggccagcgacggtaacactggaaggttctggggtgtacttgtaaatcattgtcacaag
ataatgcagataattgactggccacggagtcatccagacagcataagttatatctcatca
gcctttggaattgatgtagcctggcaatactattacaagagtttggcatctgcaatatgt
gacactggaaagtccatccttcctaagcatctgcgtcttcttgccaatagtctgtcagct
agtggagaatttgtaggattaaatgctaaaggcatggcactacaacgagaacatgcgtcc
gtttcatcaccatttgtgcaagcatgcttttctaatccaggtaggagctttataaaagct
gccaagtctggaatcacggataatcttcggggcagcctggatgcattggcttggggaaac
tgtccctctttggggacaagtggactgtttgatatcatatattcagagaagggatatgag
gtagccaagtctgtagatgtgtataagctgctagaagccagttttgacaagccgaacaat
aagattggtatatattctcacaacaattcatctgacaaatgtggttctgagtttaggcat
aagaatggctatgcctttaaagagggaaaacagtggaaaaacattgtaagaaattttgtg
acggtaaatgatattcagaagctgactattgcttcaaggtgcatattgaacaagtatgcg
attgatgaactgataagtgagtttgacagatctacaatgctaagagttctgaatttccat
cctcgtagaagtgagaaattgggtattggaccacaggacattaaggttggatggcatcct
aaatttacggatagccgctgcttccatatagtacgaactgatggaactgttgaagatttt
tcataccgcaaatgcatacttggtgctcttgaaatcgttgatccaaaaatgtcgaagatc
cagaagaaaaaatggtcaggacgtgatgacacaaattcaatgcgtgtccaagcatag

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