KEGG   Vigna umbellata (ricebean): 124828378
Entry
124828378         CDS       T09662                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:vum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    124828378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vum03019]
    124828378
Messenger RNA biogenesis [BR:vum03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     124828378
SSDB
Motif
Pfam: XRN_M
Other DBs
NCBI-GeneID: 124828378
NCBI-ProteinID: XP_047157620
LinkDB
Position
Unknown
AA seq 595 aa
MKKVDYVECDMEGDVDGDVESWLDITLEFSICNVKFFIPQVFLDRVERFIQFIAIHEDQI
FQKRVCIQLAAENNEEIRARRRGEMPREPRASLVDKVKLGDPGYKERYYAEKFGVSNLEE
IDKVRKDTVLKYVEGLCWICQYYYQGVSSWKWYYPYHYAPFASDFKDLTDQEITFLPGEP
FKPFDQLMGTLPASSSSALPKKYRDLMTDPSSPIFHFYPADFEIDMNGKRFTWQGVAKLP
FIDEKKLLAATRKIEDTLTEEEQFRNSVMLDLLYVNHAHDLASHILSYYHVSSQLAPHER
CVRPIDTNASSGGMNGYFWLCERNVFSSVVSSPIRGLQDVESNQVLNITFLNPRKHNHIR
TLPDGVVIPNKVLKATDIKPFPVLWHEENIVQRMQARERPRVSGAIAGYQLGEAAHRLVK
NTLNIKSNDASHGLLEQPPVHHKTNRLRSAGYRKYYGENASGYNGQYNHHGMMTTPKYGG
HSDRQHFKIRDRLQREEQFHNVKTEFSTLSMDERERARSLRLPSSRPIANLQPRFVQNMD
PSIPSTKWMTKPQPTNGMPTRNQEAALGPTTYDKQTKKVYQVKIRQIDTPESAKQ
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgaaaaaggtagattatgtggaatgtgatatggagggtgatgtggatggtgatgtggag
agttggttggatataactcttgaattctctatctgcaatgtgaaattctttatacctcag
gttttcttagatagagtggaacgatttatccagtttattgcgattcatgaagatcaaatc
tttcagaaacgagtctgcattcagctggctgcagaaaataatgaagagattagagcaagg
agaagaggagaaatgcctcgagaaccccgagcctcccttgtggataaggttaaattagga
gatcctggatacaaggaaagatattatgctgaaaagtttggtgtatcaaatcttgaggag
attgataaagttaggaaagataccgtcttgaaatatgtggaaggcctttgttggatttgt
cagtattattatcagggtgtcagctcatggaagtggtattacccatatcattatgcaccc
tttgcttctgattttaaagatctaactgatcaggaaataactttcttaccgggagaacca
tttaaaccgtttgatcagctcatgggcaccctacctgcttcaagttcaagtgcactgcct
aagaaatatagagatttgatgaccgatccttcgtcacctatttttcacttttaccctgct
gattttgaaattgatatgaatggaaaacgatttacatggcagggtgttgccaagctgcca
tttattgatgagaagaaattgcttgctgccacaagaaagattgaagacacattaacggag
gaagaacagtttcggaacagtgtgatgcttgatttgctatatgtcaatcatgcacatgat
ttggcttcacatatcttatcttattatcacgtttctagtcaactagccccacacgaaaga
tgtgttaggccaattgacacaaatgctagcagtggtgggatgaatggatatttttggtta
tgtgaaagaaatgttttcagctctgttgtatcttctcccatcagaggattgcaagatgtt
gaatctaaccaagtcttaaatattacatttcttaaccctcgtaaacacaatcatatccgg
acacttccagatggtgtagtaatacccaacaaggtattaaaagccactgatattaaacct
tttcctgtgctgtggcatgaggagaatattgttcagcgaatgcaagcaagagaaaggcca
cgagtatctggagccatcgctggatatcagctgggagaagcagctcatcgacttgttaag
aacaccctcaacattaaatcaaatgacgcatcccatggattgctggagcaacctccagtc
catcataaaacgaacaggcttcgatcagctggatatagaaaatattatggtgagaacgca
agtggttataatggacaatataatcaccatggcatgatgactacaccaaaatatggtgga
catagtgacagacaacattttaagatacgcgataggttacagcgtgaagaacagttccac
aatgtgaaaactgagttttctactctatcgatggatgaaagagagagagccaggtcatta
aggcttccaagttccagaccaatagccaatttacaaccccggtttgtgcagaacatggat
ccttcaataccatctacaaaatggatgactaaaccacaacctacgaatggcatgcctact
aggaatcaagaagctgcattggggccaacaacttatgataagcagaccaagaaggtttac
caagttaaaatacgtcagatagatacaccagaatctgcgaagcaatag

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