Vigna umbellata (ricebean): 124828991
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Entry
124828991 CDS
T09662
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124828991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124828991
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124828991
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Big_2
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_9th
Invasin_D4
Motif
Other DBs
NCBI-GeneID:
124828991
NCBI-ProteinID:
XP_047158358
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MTIVALLLSFLVAVTVVVSPSHAASSGPHIADVNLLLPPKMTYPVDYRLQGSDGCFQWSW
DHHDILSVEPEYNSTSKCSTSARIRSISPYSVRKETAVYAADLKTGIVIRCKVFIDNISR
IQIFHNSIKLDLEGLATLRVRAFDNEENVFSSLVGLQFMWSLMPEANGLPHHLVNVPLKD
SPLSDCGGLCGDLDIQIKLEDNGVFSDLFVVKGIEIGHEIVSVRLLETQLKNLADEIVLT
VAEAMSLDPPSPVLVLVGAVIPYTLKVIRGNVPEVVTLPSPHHQWSVSNASVAQVDSKTG
LAYAWNLGMTAVIVEDTRIAGHEQVSSLNVVLPSSLCLYISPLSSSGDPVEGVKSNPLMT
RWYVISGHQYLIQIKVFAQDHPAQEIYITENDDVKVYDNDSDQYWKTFFVSNDIAVKHGW
RNSKILEAYSPGLGKLTASLSYPGGADDKKEIIKAVQEIMVCDKVKFTLDNDSGMILLPW
STGVYQEVELKATGGCAKTVSDFRWLSSDSSTVSVTAFGIVQAKKPGKATIKVLSVYDSL
NYDEVLVEVSIPSSMVVLHNFPVETVVGSYLKAAVTMKAANGSFFYVCDAFNSLIKWKSG
SESFVIVNATQELLYLKTEPNTQLRSSVNGSPCSWTYVLASHPGQAVIQAIFSKEDHHHS
HSPVGLKASLRIAAYRPLIVRQAGDGNQFGGYWIDSAQAENDKQSHGLEELYLVPGTSLD
IALVGGPEQWDKGVDFIETVEVLDQANALAEDGVLVQRVSDSFRNLYGVLCQKLGTFKLR
FQRGNLVGEDHPLPSVAEVWLSVMCSIPSSIVLIADEPVNECRIIKAAAQAERSSGRLHD
APVIVANGRTIRVSAVGISDLGEAYANSSSLNLRWELSSCEGLAYWDYGFNIVKSNSWEI
FLALQNESGLCTVRATVTGFAENLGDDTFHGFTETENVLTDAIHLQLVSTLRVDPEYKLI
YFNPDAKVNLTIVGGSCFLEAVTNDSQVVQVIQPPSGFECLQLILSPKGLGTANLNIYDI
GLNPPQRASALVQVADIEWIKIISGKVISMMEGSLQTIDLLAGSTGGNSFDASQFVYMNL
HVHIEDNIIELVDIDDFSSLVGGHVNAPSFKIKGRHLGITTLYVSAVQHLGHVVQSQAIK
VEVYAAPRIHPDNIFLLPGASYVLTMEGGPTLGVRVEYGIENDKIASIDRYSGRLSASSI
GNTTITASVFVNGNTVICEARSILRVGIPSTVMLHTQSEQLGIGRKLPIYPLFPEGTLFS
FYELCKNYQWTIEDEKVLSFKVAETLHGDGIQFTTSARSEVNSYFDENNLGFINVLYGRS
PGKTNVAVSFSCELSTSGSRAQSMFYSSSLSVTVIPDLPLALGIPMTWILPPYYTMTNRL
PSLSESYAQYDSRNRRGTISYSLLRSLEKNDAMQKDAIFIDGDRIKTTKSNNLACIQAKD
RTTGRTEIASCVKVSEVTQIRIASKEVLLNVINLAAGAELDLPTNFYDALGNPFHEAYNA
VPFHAETNYPDVLYVNKTADGKGNVHIKAIRHGNVLVRISISEDLQKSDYVLIRVGAHIY
PQNPVLHIGSPLNLSIKGLSDTVSGQWFTTNRSVVSVDTLSGTAKAIGQGSAQVSFRYGG
SKLQTTITVLKGDYISLLGPKEMLTNVPYPSKGYNFSVKFSESLGAPGENTRILFNCRVD
PPYVGYVKPWLDQESGNSYCLFFPYSPEHLVHSVPKLEGMRPDVSVSISASLENEHISGS
ASALFIGGFSIMEMSKNPLLLNLTPGSNKTAITILGNTDVEIHWHHRDLIMISLIHREDI
GIRGYARYEVQLLKAKRFRDKIRITLPANGQSVEIDVNHEPEETAPSSIAINKAFWGSIL
GCFLLLILSIVIFTRFFEKPERSQQTSSSVTTTTSIAAPITPDRSNPSAVNEMSPRTPQP
FVDYVRRTIDETPYYKREGRRRVNPQNTF
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtggccttgttactgagttttctggtagcggtgacggtggtggtgtcgccg
tcgcacgcggcttccagtggtccccacattgctgacgtcaacttgctcttgccgccaaaa
atgacttatccagttgattaccggctccaaggaagcgacggctgcttccaatggtcatgg
gatcatcatgacattctgtctgttgagcctgagtataattcaaccagcaagtgctcaact
agtgcaagaataagatccatttccccttacagtgtgcggaaggaaactgctgtttatgct
gcagacttgaaaactgggattgtgattcgctgcaaagtctttattgacaacatatcacga
atacagatatttcataattctattaaacttgatttagaggggcttgccacactacgtgtt
cgagcctttgataatgaagaaaacgtattttcttcattagttggcttacagtttatgtgg
agccttatgcctgaagccaatggattacctcatcaccttgttaatgttccactaaaggat
tctccccttagtgattgtgggggattatgtggtgacttagatatacaaataaagcttgaa
gacaatggtgtattttcagatctttttgtagtaaagggaattgagattggtcatgagatt
gtgtcagtgcgtttgcttgagacacagttaaagaatttagctgatgagattgttcttact
gttgctgaagctatgtccctcgatcctccttcaccagttcttgtacttgttggtgcagtc
attccctacacccttaaagtcatccgtggaaatgttcctgaagtggttactttaccctca
ccacatcaccaatggtctgtctcaaatgcttcggttgctcaggtcgactcaaaaacaggg
ttagcatacgcatggaacttgggcatgacagctgttattgttgaagatactaggattgct
ggccatgaacaagtgtcttcattgaatgtggtcctaccatcttctctatgtttgtatata
tcacctttatctagttctggtgatccagtggaaggagtaaaatctaaccctctgatgacc
cggtggtatgttatatctggccatcaatatcttatccagataaaggtttttgcacaggat
catcctgcacaagaaatttatattacagagaatgatgatgttaaggtttatgataatgat
tctgatcaatactggaaaacattttttgtttcaaatgatattgctgttaaacacggctgg
cggaattctaaaatcttggaggcttattcaccaggacttggaaaattgacagcttctttg
agctaccctggtggggctgatgacaaaaaggagattatcaaggctgtgcaagaaataatg
gtttgtgataaagtaaagttcaccttggacaatgatagtggaatgatcttattaccatgg
tcaactggtgtttatcaggaggtggagttaaaggctacaggaggctgtgcaaaaactgtg
agtgacttcagatggctatcttcagactcgtccacagtatctgtaacagcttttggtatt
gtccaggcaaaaaaacctggtaaagctactatcaaagtgttatctgtatatgattcacta
aattatgatgaggtccttgttgaagtctccattccttcttctatggttgtgcttcacaat
tttcctgtagaaactgttgttggatcatatcttaaagctgctgtgacaatgaaagcagca
aatggttcctttttctatgtatgtgatgcctttaattcattgataaagtggaagtctgga
agtgagtcttttgtaattgtcaatgcaactcaggagttgttatacttgaaaactgagcca
aatactcagctccgatcatcagtcaatggttctccctgttcctggacatatgttttggct
tctcatcctggtcaagctgtgatccaggccattttttccaaagaagatcaccaccacagt
catagtcctgttggactaaaagcatccttacgcattgcggcatatcgaccccttattgta
cgtcaggcaggtgatggaaaccaatttggtggttactggattgattcggctcaagcagaa
aatgacaagcagtcacatggtttagaggaattatatcttgtacctggcacaagtttagac
atagcacttgttggtggtcctgaacaatgggacaaaggtgtggatttcattgaaactgtg
gaagttttggatcaagccaatgctctagctgaagatggagttcttgtgcaacgtgtatct
gatagcttcaggaatttgtatggagttttatgtcaaaagctgggaacctttaaacttcgt
ttccaacgtgggaatttggttggggaggaccatcctctgccttcagtggctgaagtttgg
ttgtctgtgatgtgtagcattccttcttctattgtacttatagctgatgaaccagtgaat
gaatgcagaataattaaagctgcagctcaagctgaacgtagttcaggtagacttcatgat
gcccctgttattgtggcaaatgggcgcactattcgtgtatctgcagttggtatcagtgat
ttgggagaggcttatgcaaattcatcttctctcaatttgaggtgggaacttagcagttgt
gagggactggcctactgggattatggttttaatatagtgaagtctaacagttgggagata
tttctggccttgcaaaatgaatcaggcttgtgcactgttcgtgctactgttactggcttt
gctgagaacttgggagatgatacatttcacgggtttactgaaacagaaaatgttctgaca
gatgcaattcatttacagcttgtttctacccttagagttgatccagagtacaaattgata
tatttcaatcctgatgcaaaggtaaacctgactattgttggtgggagctgtttcttggaa
gctgttacaaatgattctcaagttgtacaagttattcaaccaccatctggatttgaatgc
ctacaattgattttgtcccctaaaggattagggacagccaatctgaatatatatgatatt
ggactaaatcctccacaaagagcttctgcactggttcaagttgcagatatagagtggatc
aagatcatatcaggaaaagtgattagcatgatggaaggaagtttgcaaactattgactta
ttggctggtagtactggcggaaatagttttgatgcttctcagtttgtttacatgaatctt
catgtacacattgaagataatataattgagctggtggatattgacgatttctcaagcctt
gttggtggacatgttaatgcaccaagttttaaaataaaagggagacatcttggaattaca
accctttatgtcagtgctgtacaacatttgggacacgtagtacaaagtcaagctattaag
gtggaagtttacgctgccccaagaatacaccctgacaatattttcctactacctggtgca
tcgtatgtgcttaccatggaaggaggcccaactcttggggttcgtgttgagtatggaatt
gaaaatgataaaattgcaagtattgatagatattctggacgactctcggcaagttctatt
gggaacactacaattactgctagtgtctttgtgaatggtaatactgtaatttgtgaagca
cggagtattttaagggtgggaattccgtctactgtcatgttgcatacgcagagtgaacaa
cttgggattggccgaaaattgccaatttatccgttatttcccgagggtactctgttttct
ttctatgagctatgtaaaaattaccagtggaccattgaagatgaaaaggtattgagcttt
aaggtggcagagaccttgcacggggatgggatccagtttactacttcagcaagaagtgaa
gttaatagttattttgatgagaataaccttggctttattaatgtcttgtatggaagatct
ccaggcaagaccaatgttgctgtgtctttctcgtgtgaactttcaacttctgggtcaagg
gcacagtccatgttttacagttcatctttgtcagtaacagtgattcctgatcttccactg
gctttgggaatccccatgacctggattcttcctccctactatacaatgacgaaccgtttg
ccttcattgtcggaatcctatgcacaatatgatagtcgaaatcgcaggggaaccatcagc
tattctttattgagaagtttagagaaaaacgatgctatgcaaaaagatgccatattcatt
gacggggacagaattaaaactaccaaaagtaataatcttgcttgtattcaagctaaagat
cgtactacaggaagaacagagattgcttcttgtgtcaaggtttctgaggtgactcaaatt
agaatagccagtaaggaggttctcctcaatgtgattaaccttgctgctggtgcagaactt
gatcttccaacaaacttttatgatgctttaggaaatcctttccacgaagcctacaatgct
gtgccttttcatgctgaaactaactaccctgatgttctctatgtaaacaaaacagctgat
ggaaaaggcaatgtccatatcaaggcaattcggcatggtaatgttcttgtgcgtatatca
attagtgaagatctgcagaaatcagattatgtgctgattagagtgggtgcccatatatat
ccgcaaaatccagttcttcacataggaagtcctcttaacctaagcataaaaggtttgagt
gatacagtttctggacagtggtttactacaaatagaagtgtagtatccgttgatacacta
tctgggacggccaaagctattgggcaaggttcagcccaagtatctttccgttatggagga
tcaaaactgcaaacaacaattacagtgttgaaaggagattatatttctttgcttggccca
aaggagatgttaactaatgtcccatacccctcgaaaggatacaacttctccgtgaaattc
agtgaatcccttggtgcacctggagaaaacacgagaattttattcaattgtagagtagat
ccaccatatgtggggtacgtgaagccatggctggatcaggaatctggcaattcatattgc
ttatttttcccttactcaccggagcatttggtgcactcagtacctaagttagaaggcatg
aggccagatgtatcagtctccatttctgcttctcttgaaaatgaacatatatctggatct
gcttcagcactttttattggcggattttctataatggagatgagcaagaatccgttgctg
ctgaatctgacaccaggctcaaacaaaactgccattaccatattgggaaatactgatgtt
gaaattcactggcatcatcgagatttgattatgatcagtctcatccacagagaagatatt
ggcattcgtgggtatgcacggtatgaggttcaacttctgaaagccaagagattcagagac
aaaatccgcatcacacttccagctaatggccagagtgtggaaatagacgtcaaccatgaa
cctgaggaaacagcaccatccagcatagccataaataaagccttctggggaagtattctg
ggatgttttctgctgttgattttatcaatcgttatcttcacacgtttcttcgagaaacca
gagagatctcagcaaacaagttcctcggttactacaactacaagcattgcagctcccata
actcctgatagaagcaacccgtctgctgtaaatgaaatgtctccgcgaacacctcaacca
tttgtagactatgtgaggagaaccatcgacgaaactccatattataagcgagaagggaga
agaagggttaatccacagaacacgttttag
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