KEGG   Vigna umbellata (ricebean): 124829759
Entry
124829759         CDS       T09662                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03420  Nucleotide excision repair
vum04120  Ubiquitin mediated proteolysis
vum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124829759
   04120 Ubiquitin mediated proteolysis
    124829759
  09124 Replication and repair
   03420 Nucleotide excision repair
    124829759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vum04121]
    124829759
   03400 DNA repair and recombination proteins [BR:vum03400]
    124829759
Enzymes [BR:vum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     124829759
Ubiquitin system [BR:vum04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   124829759
  Multi subunit type E3
   SCF complex
    Ring finger protein
     124829759
   Cul2 complex
     124829759
   Cul3 complex
     124829759
   Cul4 complex
     124829759
   Cul7 complex
     124829759
   Cul8 complex
     124829759
   Cul9 complex
     124829759
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124829759
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124829759
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 124829759
NCBI-ProteinID: XP_047159278
LinkDB
Position
Unknown
AA seq 116 aa
MATLDSDVPMIPAGEASSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcgactcttgattccgacgtgccaatgattccggccggcgaggcatcgagcagcgcc
ggaccgtcttccaagaagcccaagcgtttcgagatcaaaaagtggaacgcggtcgcactc
tgggcttgggacatcgttgtcgataactgtgccatctgccggaaccacatcatggatcta
tgcatcgagtgccaagccaaccaggccagcgcaactagcgaagaatgcacagtggcgtgg
ggcgtttgtaaccatgcttttcacttccactgcattagtcgatggctcaagactcgtcaa
gtttgtcctctagataacagtgagtgggagtttcagaaatacgggcactag

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