Vigna umbellata (ricebean): 124842871
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Entry
124842871 CDS
T09662
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124842871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124842871
Transcription factors [BR:
vum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124842871
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
124842871
NCBI-ProteinID:
XP_047175417
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MLELNRSKMNHCVPDFEIQIDDDEEFPIPVSKKPSMQNDEIMELLWQNGQVVMQSQNHRP
LRKPPHTLVAGGVSPAREIRSSEAENYGNQHLFMQEDEMASWLHYPIHEDPPPFDHHDFS
ADMLNPPPTNVIASVTHSSAAVQSSFRTTELRHPAPRPPIPPSRRPVPAANSMQNFSHFS
NHGNSSSSSKATAAQPTVVDSCQTPVATAEHAETGRASVTAADAGKAAESGGRETATCDV
TVTSSPGGSSGSAEPVQRELDRKRKGREPEESEFLSEDVDFESPEAKKQGRGSTSTKRSR
AAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGC
GMVPMMFPGIQQYLPPMGMGIGMGMGMEMGMNRPVMPFPNMLTSSTLPAATAAAHLGPRF
PPVPPFHIPHVPAPDSSRMPAPNLSNNSMLNALGTQGPDQSRIPNYTDPYQQYVGLQQVQ
LQLMQAMNQPNVSKPSTSRGQENPEKHQSGKLPF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactcaacagaagcaaaatgaatcactgtgttccagatttcgaaatccaaatc
gacgatgacgaagaattcccaattcccgtctcaaagaaaccctcaatgcaaaacgacgag
atcatggaactgttgtggcaaaacggccaggttgtgatgcagagccaaaaccatcgacca
ctcagaaaaccgccgcatacgttggttgccggcggagtctctccggctagggagattcga
tcctctgaagcagaaaactacggtaaccaacacttgttcatgcaagaagacgaaatggct
tcgtggcttcactatccaatccacgaagatcctcctccctttgatcaccacgatttcagc
gccgacatgctgaacccgccgccgacaaacgtaatcgcgagcgtgactcacagtagcgcc
gccgtacaatcctcctttcgcacgacggagcttcgacatcctgctcctcgtccgccgatt
cctccttctcggcggccggtgccggcggcaaacagtatgcagaatttctcacacttctcg
aatcacggcaattcgtcgtcgagttccaaggccacggcggcgcaaccgacggtggtggat
tcgtgccagacgccggtcgcgacggcagagcacgctgaaaccggtcgcgctagcgtgacc
gccgccgatgcaggtaaggcggcggagtctggaggaagggagacggcgacgtgcgatgtg
acggtgacgtcgtctcctggtggttcaagcgggagcgcggaaccagttcagagggaactt
gaccgaaagaggaaggggagagaaccggaggaatcagagtttctgagcgaggatgtagat
tttgaatctccggaagctaaaaaacaagggcgtggttctacatctactaagagatcccgt
gctgcagaagtccacaatctctcagagaggaggcgtcgagatagaattaatgaaaaaatg
aaagctttgcaagaacttatacctcgatgtaacaagtctgacaaagcttcaatgttggat
gaagcaattgaatatttgaagtcactgcaattacaagtgcagatgatgtccatgggatgc
ggcatggtacccatgatgtttcctggaatccagcagtatttgccgccaatgggaatggga
attggcatgggtatgggcatggaaatgggaatgaacagaccggtaatgccatttcccaat
atgttaactagttcaactttgccagcagcaactgcagctgctcatttgggaccgaggttt
ccccctgtgcctcctttccatattccccatgttcctgcccctgattcatccagaatgcca
gcaccaaatctgtcaaataatagtatgcttaacgcacttggtacgcaaggtccagatcaa
tcacgtatcccaaactacactgatccttatcagcaatacgtcggcctccaacaggtgcag
ttacaattaatgcaggcaatgaaccaaccaaatgtgagcaagcccagtaccagtaggggt
caagagaatccagaaaaacatcagtcaggtaaattgccattctag
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