Vigna umbellata (ricebean): 124845669
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Entry
124845669 CDS
T09662
Name
(RefSeq) ATP-dependent helicase rhp16 isoform X1
KO
K15083
DNA repair protein RAD16
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124845669
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
124845669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-RING_UBOX
zf-RING_5
ResIII
zf-C3HC4_2
zf-C2HC_2
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
RING_XB3-XBAT31
zf-C3HC4_4
Ephrin_rec_like
Herpes_UL4
Motif
Other DBs
NCBI-GeneID:
124845669
NCBI-ProteinID:
XP_047178764
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MELRSRRRLSNPSVSGTINCSGNEQQPKDDTVVEDETKGQSSNNKDKGVSVMLSDSDVVS
GSDSDSDYEDEELVGGSLLDLNKYPFSSISVSDGEDYGSDSSDGDILLFKKAKVPGSRAR
RKSMNTEKGEPSDVVRVVDREYSMISPVLVPSAFKGTKKRKYTKKGSKGDSRPVLLWNAW
EEEQEKWIDQHIAEDFDLDIQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSSSRG
GILADEMGMGKTIQAIALVLAKREFQDSCEPDQSIPCSSNLLPAIKGTLVICPVVAVTQW
VSEIDRFTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYFVVENEYRKHMMPPKERCPY
CGKLFLPSKLMYHQSYFCGPDAVRTEKQSKQAKKKREVTKGKTKECESSKILKGSIKKKG
DKMCIDMEDSDAVPVRSDRSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWAL
SGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSKECSVCTHSSVRHFCWWNK
YVATPIQSFGNGDSGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIK
EQDYYESLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSGSRSA
VMANNATTVEQICGICHEPVEDLVVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVD
LTSNKDAGDQVKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVF
SQFTSFLDLINYSLHKSGVSCVQLNGSMSLNARDAAIRRFTEDPDCKIFLMSLKAGGVAL
NLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKEL
VFEGTIGGSSDALGKLTEADLRFLFVT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcgacgcctttcgaatccctcagtgtctggtactatcaattgt
tccgggaatgagcagcagcctaaggatgatactgttgtggaagatgaaaccaagggccag
agtagcaacaataaagacaaaggtgtttccgttatgttgtctgattcggatgtagtttct
ggttccgattccgattccgattatgaagatgaagaattggttgggggctcgctgctggac
ttgaataaatatccattttcaagcatcagtgtttctgacggagaagattatggttctgat
tcatctgatggtgacatacttttattcaagaaggcaaaggttccggggtccagagcgaga
agaaagagtatgaacacagaaaaaggagaaccgagtgatgtggtgagggtggtggatcgt
gaatattcaatgatttcaccagtattggttccatctgcttttaagggaactaagaagagg
aaatatacaaaaaaaggaagtaaaggagattctcgtccagtgttgttgtggaatgcatgg
gaagaagagcaagagaaatggattgatcagcatatagcagaagattttgacttagatatt
cagagtgaagtaatgaatgaaactgctgaggcgccctctgatctgactatgcctttactt
agataccagagggaatggttagcctgggctttgaaacaagaacattcttcaagtagaggt
ggaatacttgcagatgaaatgggaatggggaagactattcaagcaattgctcttgtcctt
gccaaacgtgaattccaagacagttgtgaaccagatcaatccataccatgttcatccaac
ctgttgcctgctatcaaaggaacacttgtcatatgtccagtggttgctgttactcagtgg
gtcagtgagattgatcgttttactttaaaaggaagcaccaaggtgctggtctatcatggg
gctaatagagggaggagtggggatcgatttgcagattatgattttgtgataactacatac
tttgttgttgagaatgagtacaggaagcatatgatgcctcctaaagagagatgcccatat
tgtggaaaattatttttgccaagtaagttgatgtatcatcaaagctatttttgtggacct
gatgctgttagaacagaaaaacaatcaaagcaagctaagaagaaaagggaagttactaaa
gggaagaccaaggaatgcgaaagtagcaagattttgaagggttctatcaagaaaaaggga
gacaaaatgtgcatagatatggaagattctgatgctgtacctgtacgtagcgataggtca
tttctccatgctgttaaatggcaaaggatcatattggatgaggcacactatatcaaatct
agacactgtaacactgctaaagcagttcttgctttagattctacctacaaatgggcgttg
agtggcactccccttcagaaccgagttggagagctgtattcgctgatacgattcctgcaa
ataactccttattcctattacttgtgcaaggactgtgattgcaggattcttgatcatagc
tctaaagaatgttcagtctgcactcacagttccgtgcgacatttctgttggtggaataaa
tatgttgccacaccaattcaatcttttggaaatggtgattctgggaaaagagctatgata
ctgcttaaacataaagttttgaagaacatagtattaaggcgcacaaaaataggcagggct
gctgatcttgcacttccacctagaattgtttcgttgagaaaggattgcctagatattaaa
gagcaagactattatgaatcgttatacaatgaaagtcaggcacaatttaatacatacatt
gaagcaaatacactgatgcataattatgctcatatatttgatctcctcacacggctgcgt
caggctgttgatcatccataccttgtggtatattctcaaagttcaggttcaagaagtgca
gttatggccaacaatgctactaccgttgaacaaatttgtggtatatgccacgagccagta
gaagatcttgttgttacctcctgtgagcattcattttgccgtgcatgcttgatagactac
tactctacttccttgggccaagtatcatgccctgcttgctccaaattacttacagttgat
ttaacatccaacaaggatgctggggatcaggttaaaacaacaattaagggtttcagatcc
tcgagcattttgaatagaattcgccttgagaactttcagacgagtactaaaatagaggct
ttgagagaagaaataagattcatggtcgaaagggatggttctgccaaagggattgttttt
agccaattcacatcgttcttggatcttataaactactctttacacaagtctggagtatct
tgtgttcagttgaatggaagcatgtcattgaatgctagggatgctgccattcgaagattt
actgaagatccagattgcaaaatttttctcatgagcttgaaggctgggggtgttgcactc
aatttgacggtagcttcacacgtcttccttatggacccttggtggaacccggccgtggag
cgccaggctcaagacagaattcaccgaatagggcaatacaaacctataagaattgtgagg
tttgtcatcgagaacacaatcgaggagagaattttgaaactccaagagaagaaagaactc
gtgtttgaagggactatcggtggttcttctgatgctctggggaaattgacagaggcagac
ttgagatttttgtttgttacctaa
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