Vigna unguiculata (cowpea): 114174271
Help
Entry
114174271 CDS
T06017
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114174271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vun03000
]
114174271
Transcription factors [BR:
vun03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
114174271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
114174271
NCBI-ProteinID:
XP_027914887
LinkDB
All DBs
Position
1:33237203..33241587
Genome browser
AA seq
531 aa
AA seq
DB search
MTNHNHSVPDFDIQMDDNNNPYPILTPSGLPRQSKPSIAEDDVMELLWHNGQVVMQSQNH
RSLRKPTPPSRNSHDASAAGPSESREIRPQLDNFNQHLFMQEGEMASWLHYPIDDDDDVP
PLDQAFCADFLYSPPTVNNSTAMQTLATSQLTDHRPMSAPPRPPIPLPRRLEPKTPNFAY
FARHNTRADEQSVKVAAKESTVVDSCETPAATAAAVSRVSETVRNAVEATEGGAGAPVPS
TSGGGGRSTMMCDVTMASSPGGSSSSGEPVQVAPAEERKRKGREAEGWESQSEGTHVNGG
VKDVDFESEAKKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA
SMLDEAISYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPAMGMGVGMGMGMEMGMNRPVM
PFPNMLPGSALPAATAAAHLGPRFPMPPFHMPRVPAPDSSRMQPENQSDNNNNMVAPAPP
HPNQSRLPNFTDPYQQYLGPHQMQFQVIQNQAMNQPNVGKPSTSRDNPENR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcacaatcactctgttccagatttcgatattcaaatggacgacaacaacaac
ccataccccattctcacgccttcgggattacctcgccaaagcaaaccctctattgcagag
gacgatgtcatggagctgctatggcataacggccaggttgtgatgcagagtcagaatcac
cgttcccttagaaaacccacgccgccgtccagaaactcccacgatgcctccgccgccggt
ccttccgaatccagggagattcgaccgcagctcgacaatttcaatcaacatctcttcatg
caagaaggcgaaatggcttcctggcttcactatccaatcgacgacgacgacgacgtacct
ccgttggatcaggctttctgcgccgatttcctctactcgccgcccaccgttaacaacagc
acggccatgcaaactctcgccacgtctcagctcacagaccaccgccccatgtccgcaccg
cctcgacctccaattccgctgccgagacggctggaaccgaagacgccgaacttcgcgtac
ttcgccaggcacaacacaagagccgacgagcagagcgtgaaggtggccgcgaaggaatcc
acagtggtggattcgtgcgagacgccggccgcaaccgcagcggcggtttcgagagtttcg
gaaactgtgaggaacgcggtggaagcgacggaaggaggcgccggagctccggtgccttcg
acgagtggcggtggcggtaggagcacgatgatgtgcgacgtgactatggcttcgtcgccg
ggcggctcgagtagtagcggcgagccggttcaggtggcgccggcggaagagcggaagcgg
aagggtcgggaggcggagggatgggagtctcagagcgagggtacgcatgtaaatggagga
gtaaaggatgttgattttgaatcggaagcaaagaagcaagttcgaggatcaacatctaca
aagagatcacgtgcagcggaggtgcataatctctctgagaggaggcgtcgtgatcggatt
aatgaaaagatgagagctctgcaagaacttatacctcgatgtaataagtcggacaaagct
tcaatgttggatgaagcaatttcgtacttgaaatcattgcagttacaagtgcagatgatg
tcgatgggatgtggcatggtacctatgatgtttcctggaattcagcagtacatgccagca
atgggaatgggggttggaatgggaatgggaatggaaatgggaatgaacagacctgtgatg
ccgtttcccaatatgttacctggttctgctttgccggcagcaacagcagctgctcatttg
ggaccaaggtttccgatgcctcctttccacatgccgcgtgttcctgctcctgattcttcc
agaatgcaaccagaaaatcagtcagataataataataatatggttgcacctgctccacct
catccaaaccagtcacgtctcccaaacttcacggatccttatcaacaatatcttggtccc
caccagatgcagtttcaagtaattcagaatcaggcaatgaaccaaccaaatgttgggaag
cccagtaccagtagggataatccagaaaatcgttag
DBGET
integrated database retrieval system
