Vigna unguiculata (cowpea): 114185318
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Entry
114185318 CDS
T06017
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114185318
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
114185318
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-RING_UBOX
ResIII
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-ANAPC11
zf-C2HC_2
RING_XB3-XBAT31
Ephrin_rec_like
zf-C3HC4_4
Herpes_UL4
Motif
Other DBs
NCBI-GeneID:
114185318
NCBI-ProteinID:
XP_027928779
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All DBs
Position
5:42066005..42073464
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AA seq
921 aa
AA seq
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MELRSRRRLSNPTVSGNEQQPKDDTAVEDETKGQSSNNKDKGVSVMSSDSDVVSGSDSDS
DYEDEELVGSSLLDLNKYPFSCISVSDGEDYGSDSSDGDIPLFKRTKVPGSRERRKSMNT
EKGEPSDVVRVVDHEYSMISPVLVPSAFKVTKKRKYTKKGSKGDSRPVLLWNAWEEEQEK
WIDQHISEDFDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSSSRGGILADE
MGMGKTIQAIALVLAKRELQDSCEPDQSIPCSSNLLPAIKGTLVICPVVAVTQWVSEIER
FTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYSVVENEYRKHMMPPKERCPYCGKLFL
PSKLMYHQNYFCGPDAVRTEKQSKQAKKKREVTKGKTKVCDSSKILKGSIKKKGDKMCID
IEDSDAVPVRSDRSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWALSGTPLQ
NRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSKECSVCSHSSVRHFCWWNKYVATPI
QSFGNGDSGRRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIKEQDYYE
SLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSGSRSAVMAHNA
TTVEQICGICHEPVEDLIVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVDLTPNKD
AGDQAKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSF
LDLINYSLHKSGVSCVQLNGSMSLTARDAAIRRFTEDPDCKIFLMSLKAGGVALNLTVAS
HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTI
GGSSDALGKLTEADLRFLFVT
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcgacgcctttcgaatcccacagtgtctgggaatgagcagcag
cctaaggatgatactgctgtggaagatgaaaccaagggccagagtagcaacaataaagac
aaaggtgtttctgttatgtcttccgattcggatgtagtttctggttctgattccgattcc
gattatgaagatgaagaattggttgggagctcgctgctggacttgaataaatatccgttc
tcatgcatcagtgtatctgacggagaagattatggttctgattcatctgatggtgacata
cctttatttaaaaggacaaaggtgccggggtccagagagagaaggaagagtatgaacaca
gaaaaaggagaaccgagtgatgtggtgagggtggtggatcatgaatattcaatgatttca
ccagtattggttccatctgcttttaaggtaactaagaagaggaaatatacaaaaaaagga
agtaaaggagattctcgtccagtgttgttgtggaatgcatgggaagaggagcaagagaaa
tggattgatcagcatatatccgaagattttgacttagataatcagagcgaagtaatgaat
gaaactgctgaggcgccctctgatctgactatgcctttacttagataccagagggaatgg
ttagcctgggctttaaaacaagaacattcttcaagtagaggtggaatacttgcagatgaa
atgggaatggggaagactattcaagcaattgctcttgtccttgccaaacgtgaattacaa
gacagttgtgaaccagatcaatccataccatgttcatccaacctgttgcctgcgatcaaa
ggaacacttgtcatatgtccagtggttgctgttactcagtgggtcagtgagattgaacgc
tttactttaaaaggaagcaccaaggtgctggtctatcatggggctaatagagggaggagt
ggggatcgatttgcagattatgattttgtgataactacatactctgttgttgagaatgag
tacaggaagcatatgatgcctcctaaagagagatgcccatattgtggaaaattatttttg
ccaagtaagttgatgtatcatcaaaactatttttgtggacctgatgctgttagaacagaa
aaacaatcaaagcaagctaagaagaaaagagaagttactaaagggaagaccaaggtatgc
gacagtagcaagattttgaagggttctatcaagaaaaagggagacaaaatgtgcatagat
attgaagattctgatgctgtacctgtccgtagcgataggtcatttctccatgctgttaaa
tggcaaaggatcatattggacgaggcacactatatcaaatctagacactgtaacactgct
aaagcagttcttgctttagattctacctacaaatgggcgttgagtggcactccccttcag
aaccgagttggagagctgtattctctgatacgattcctgcaaataactccttattcctat
tacttgtgcaaggactgtgattgcaggattcttgatcatagctctaaagaatgttcagtc
tgctctcacagttccgtgcgacatttctgttggtggaataaatatgttgccacaccaatt
caatcttttggaaatggtgattctgggagaagagctatgatactgcttaaacataaagtt
ttgaagaacatagtattaaggcgaacaaaaataggcagggctgctgatcttgcacttccg
cctaggattgtttcgttgagaaaggattgcctggatattaaagaacaagactattatgaa
tcgttatacaatgaaagtcaggcacaatttaatacatacattgaagcaaatacactgatg
cataattatgctcatatatttgatctcctcacaaggctgcgtcaggctgttgatcatcca
taccttgtggtatattctcaaagttcaggttcaagaagtgcagttatggcccacaatgct
actactgttgaacaaatttgtggtatttgccacgagccagtagaagatcttattgttacc
tcctgtgagcattcattttgccgtgcatgcttgatagactattactctacttccttgggc
caagtatcatgccctgcttgctcaaaattacttacagttgatttaacacccaacaaggat
gctggggatcaggctaaaacaacaattaagggttttagatcctcgagcattttgaatcga
attcgccttgagaactttcagacgagcactaaaatagaggctttgagagaagaaataaga
ttcatggtcgaaagggatggttctgccaaagggattgtttttagccaattcacatcgttc
ttggatcttataaactactctttacacaagtctggagtatcttgtgttcagttgaatgga
agcatgtcattgactgctagggatgctgccattcgaagattcactgaagatccagattgc
aaaatttttctcatgagcttgaaggctgggggtgttgcactaaatttgacggtagcttca
catgtcttccttatggacccttggtggaacccggccgtggagcgccaggctcaagacaga
attcaccgaatagggcaatacaaacctataagaattgtgaggtttgtcatcgagaacaca
atcgaggagagaattctgaaactccaagagaagaaagaactcgtgtttgaagggactata
ggtggttcttctgatgctctggggaaattgacagaggcagacttgagatttttgtttgtt
acctaa
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