KEGG   Vigna unguiculata (cowpea): 114185318
Entry
114185318         CDS       T06017                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
vun  Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:vun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vun03400]
    114185318
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      114185318
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4 zf-RING_UBOX ResIII zf-RING_5 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-ANAPC11 zf-C2HC_2 RING_XB3-XBAT31 Ephrin_rec_like zf-C3HC4_4 Herpes_UL4
Other DBs
NCBI-GeneID: 114185318
NCBI-ProteinID: XP_027928779
LinkDB
Position
5:42066005..42073464
AA seq 921 aa
MELRSRRRLSNPTVSGNEQQPKDDTAVEDETKGQSSNNKDKGVSVMSSDSDVVSGSDSDS
DYEDEELVGSSLLDLNKYPFSCISVSDGEDYGSDSSDGDIPLFKRTKVPGSRERRKSMNT
EKGEPSDVVRVVDHEYSMISPVLVPSAFKVTKKRKYTKKGSKGDSRPVLLWNAWEEEQEK
WIDQHISEDFDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSSSRGGILADE
MGMGKTIQAIALVLAKRELQDSCEPDQSIPCSSNLLPAIKGTLVICPVVAVTQWVSEIER
FTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYSVVENEYRKHMMPPKERCPYCGKLFL
PSKLMYHQNYFCGPDAVRTEKQSKQAKKKREVTKGKTKVCDSSKILKGSIKKKGDKMCID
IEDSDAVPVRSDRSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWALSGTPLQ
NRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSKECSVCSHSSVRHFCWWNKYVATPI
QSFGNGDSGRRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIKEQDYYE
SLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSGSRSAVMAHNA
TTVEQICGICHEPVEDLIVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVDLTPNKD
AGDQAKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSF
LDLINYSLHKSGVSCVQLNGSMSLTARDAAIRRFTEDPDCKIFLMSLKAGGVALNLTVAS
HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTI
GGSSDALGKLTEADLRFLFVT
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagcttcgttctcgtcgacgcctttcgaatcccacagtgtctgggaatgagcagcag
cctaaggatgatactgctgtggaagatgaaaccaagggccagagtagcaacaataaagac
aaaggtgtttctgttatgtcttccgattcggatgtagtttctggttctgattccgattcc
gattatgaagatgaagaattggttgggagctcgctgctggacttgaataaatatccgttc
tcatgcatcagtgtatctgacggagaagattatggttctgattcatctgatggtgacata
cctttatttaaaaggacaaaggtgccggggtccagagagagaaggaagagtatgaacaca
gaaaaaggagaaccgagtgatgtggtgagggtggtggatcatgaatattcaatgatttca
ccagtattggttccatctgcttttaaggtaactaagaagaggaaatatacaaaaaaagga
agtaaaggagattctcgtccagtgttgttgtggaatgcatgggaagaggagcaagagaaa
tggattgatcagcatatatccgaagattttgacttagataatcagagcgaagtaatgaat
gaaactgctgaggcgccctctgatctgactatgcctttacttagataccagagggaatgg
ttagcctgggctttaaaacaagaacattcttcaagtagaggtggaatacttgcagatgaa
atgggaatggggaagactattcaagcaattgctcttgtccttgccaaacgtgaattacaa
gacagttgtgaaccagatcaatccataccatgttcatccaacctgttgcctgcgatcaaa
ggaacacttgtcatatgtccagtggttgctgttactcagtgggtcagtgagattgaacgc
tttactttaaaaggaagcaccaaggtgctggtctatcatggggctaatagagggaggagt
ggggatcgatttgcagattatgattttgtgataactacatactctgttgttgagaatgag
tacaggaagcatatgatgcctcctaaagagagatgcccatattgtggaaaattatttttg
ccaagtaagttgatgtatcatcaaaactatttttgtggacctgatgctgttagaacagaa
aaacaatcaaagcaagctaagaagaaaagagaagttactaaagggaagaccaaggtatgc
gacagtagcaagattttgaagggttctatcaagaaaaagggagacaaaatgtgcatagat
attgaagattctgatgctgtacctgtccgtagcgataggtcatttctccatgctgttaaa
tggcaaaggatcatattggacgaggcacactatatcaaatctagacactgtaacactgct
aaagcagttcttgctttagattctacctacaaatgggcgttgagtggcactccccttcag
aaccgagttggagagctgtattctctgatacgattcctgcaaataactccttattcctat
tacttgtgcaaggactgtgattgcaggattcttgatcatagctctaaagaatgttcagtc
tgctctcacagttccgtgcgacatttctgttggtggaataaatatgttgccacaccaatt
caatcttttggaaatggtgattctgggagaagagctatgatactgcttaaacataaagtt
ttgaagaacatagtattaaggcgaacaaaaataggcagggctgctgatcttgcacttccg
cctaggattgtttcgttgagaaaggattgcctggatattaaagaacaagactattatgaa
tcgttatacaatgaaagtcaggcacaatttaatacatacattgaagcaaatacactgatg
cataattatgctcatatatttgatctcctcacaaggctgcgtcaggctgttgatcatcca
taccttgtggtatattctcaaagttcaggttcaagaagtgcagttatggcccacaatgct
actactgttgaacaaatttgtggtatttgccacgagccagtagaagatcttattgttacc
tcctgtgagcattcattttgccgtgcatgcttgatagactattactctacttccttgggc
caagtatcatgccctgcttgctcaaaattacttacagttgatttaacacccaacaaggat
gctggggatcaggctaaaacaacaattaagggttttagatcctcgagcattttgaatcga
attcgccttgagaactttcagacgagcactaaaatagaggctttgagagaagaaataaga
ttcatggtcgaaagggatggttctgccaaagggattgtttttagccaattcacatcgttc
ttggatcttataaactactctttacacaagtctggagtatcttgtgttcagttgaatgga
agcatgtcattgactgctagggatgctgccattcgaagattcactgaagatccagattgc
aaaatttttctcatgagcttgaaggctgggggtgttgcactaaatttgacggtagcttca
catgtcttccttatggacccttggtggaacccggccgtggagcgccaggctcaagacaga
attcaccgaatagggcaatacaaacctataagaattgtgaggtttgtcatcgagaacaca
atcgaggagagaattctgaaactccaagagaagaaagaactcgtgtttgaagggactata
ggtggttcttctgatgctctggggaaattgacagaggcagacttgagatttttgtttgtt
acctaa

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