Vigna unguiculata (cowpea): 114190881
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Entry
114190881 CDS
T06017
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
114190881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114190881
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
114190881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
114190881
NCBI-ProteinID:
XP_027935750
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All DBs
Position
7:26410654..26430916
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AA seq
934 aa
AA seq
DB search
MGVPAFYRWLADRYPLSIADVVEDEPAVGDDGVPLPIDASKPNPNGIEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSVFEYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFEGEANILSSKDKRETSDSNVITPGTQFMAALSVALQYYIQ
TRLNHNPSWRNTKVILSDSNSPGEGEHKIMEYIRLQRNLPGFNPDTRHCLYGLDADLIML
SLATHEVHFSILREVVTLPGQQDKCFLCGQVGHFAADCQVEDFDTPDDSPIHRKKYQFLN
IWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH
IYRKDFSVIGGYLTDAGEVFLDRVERFIQFIAIHEDQIFQKRVYIQLAAENNEEIRARAR
GEMPREPRASLVDKVKLGDPGYKERYYAEKFGVSNLEEIEKIRKDTVLKYVEGLCWICQY
YYQGVSSWKWYYPYHYAPFASDFKDLADQEITFLPGEPFKPFDQLMGTLPASSSSALPEK
YRDLMTDPSSPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRKIEDTLTEEE
QFRNSVMLDLLYVNRAHDLASHILSYYHVSSQLAPHKRCVRPIDTNASSGGMNGYFWLCE
RNVFSSVVSSPIRGLQDVEFNQVLNITFLNPRKHNHIPKLPDGVVIPNKVLKATDIKPFP
VLWHEDNIGQRLQARERPRVPGAIVGYQLGEAAHRLVKNTLNIKSNNTSHGLLEQPPHHH
KTNRLRSAGYGKYHGENANGYNGQYNHHGMMTTPKYGGHNNDRQNFKIRDRLQREEQFHN
VKTEFSALSMEERERPRSLRFPSSRPIANLQPRFVQNTDPSIPPTKWMTKPQPTNSMPTR
NQEAALGPTTYDKQTKKVYQVRIRQLDTPESAKQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccagcgttttaccggtggctcgccgaccgttacccgctttccatcgccgac
gtagttgaggatgaacccgccgtcggcgacgatggcgttccgttgcctatcgacgcgtca
aaaccaaaccccaacggaatagaattcgacaacttgtacttggacatgaacggcattatc
cacccttgttttcaccccgatggcaagccggcacctgctacctatgatgatgtttttaaa
tcagtatttgaatacattgaccatctctattcgttggttcgtccaaggaagcttctctac
cttgcaattgatggtgttgcaccacgagccaaaatgaatcagcaacgttctcggcgtttc
cgagctgctaaagatgcagctgaggctgaagctgaagaggaaaggctgaggaaagaattt
gagggtgaggcaaacattttgtcttctaaagacaagcgtgagacttcagactctaatgtc
attacccctggaactcaatttatggcagccttgtcagtggctctccagtattatatacag
actaggttgaaccacaatcctagctggaggaatacaaaggttatattgtctgattcaaac
tcgcctggtgaaggagaacataaaataatggaatacatccggttacaacgcaaccttcct
ggtttcaatccagatactcgacattgtttgtatggattggatgctgatttgattatgctc
tccttagctacacacgaggttcacttctcaatattgagggaggtagttactttacctggt
caacaggataagtgttttttgtgtggccaagttggccattttgcagctgattgtcaagtt
gaggactttgatactcctgatgatagcccaattcacaggaagaaatatcagtttcttaac
atctgggtgcttcgtgaatatttgcaatttgaattggagatacccaaccctccatttgag
attgactttgaacgagttgtggacgattttgtatttctatgcttctttgttggcaatgat
ttcctcccacatatgccaacattagagatcagggagggggctataaatttgttgatgcat
atatacagaaaggatttttctgtcataggtggttatcttactgatgcaggcgaggttttc
ttagatagagtggaacgatttatccagtttattgctattcatgaagatcaaatctttcag
aaacgagtttacattcagctggctgcagaaaataatgaagagattagagctagggcaaga
ggagaaatgcctcgagaaccccgagcctcgcttgtggataaggttaaattaggagatcct
ggatacaaggaaagatattatgctgaaaagtttggtgtatcaaatcttgaggagattgag
aaaattaggaaagatactgtcttgaaatatgtggaaggcctttgttggatttgtcagtat
tattatcagggtgtcagctcatggaagtggtactacccatatcattatgcaccctttgct
tctgattttaaagatctagctgatcaggaaataactttcttaccgggagaaccatttaaa
ccatttgatcagctcatgggcaccctacctgcttcaagttcaagtgcactgcctgagaaa
tatagagatttgatgactgatccttcatctcctatttttcacttttaccctgctgatttt
gagattgatatgaatggaaaacgatttgcatggcagggtgttgccaagctgccatttatt
gatgagaagaaattgcttgctgccacaagaaagattgaagacacattaacggaggaagaa
cagtttcggaacagtgtgatgcttgatttgctatatgtcaatcgtgcacatgatttggct
tcacatatcttatcttattaccatgtttctagtcaattagctccgcacaaaagatgtgtt
aggccaattgacacaaatgctagtagtggtgggatgaatggatatttttggttatgtgaa
agaaatgttttcagctctgttgtatcttctcccatcagaggattgcaagatgttgaattt
aaccaagtcttaaatattacatttcttaaccctcgtaaacacaatcatatcccgaaactt
ccagatggtgtagtaatacccaacaaggtattaaaagccactgatattaaaccttttcct
gtgctgtggcatgaggacaatattggtcagcgactgcaagcaagagaaaggccacgagta
cctggagccatcgttggatatcaactgggagaagcagctcatcgacttgttaagaacacc
ctcaacattaaatcaaataacacctcccatggattgctggagcaacctccacaccatcat
aaaacgaacaggcttcgatcagctggatatggaaaatatcatggtgagaacgcaaatggt
tataatggacaatataatcaccatggcatgatgactacaccaaaatatggtggacataat
aatgacagacagaattttaagatacgcgataggttacagcgtgaagaacagttccacaat
gtgaaaactgagttttctgctctatcaatggaggaaagagagagacctaggtcattaagg
tttccaagctccagaccaatagccaatttacaaccccggtttgtgcagaacacggatcct
tcaataccacctacaaaatggatgactaaaccacaacctacgaatagcatgcctactagg
aatcaagaagctgcgttggggccaacaacttatgataagcagaccaagaaggtttaccaa
gttagaatacgtcagctagatacaccagaatctgcgaagcaatag
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