Vespa velutina (Asian hornet): 124956989
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Entry
124956989 CDS
T09814
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124956989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vve03400
]
124956989
Enzymes [BR:
vve01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
124956989
DNA repair and recombination proteins [BR:
vve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
124956989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124956989
NCBI-ProteinID:
XP_047369492
LinkDB
All DBs
Position
24:979465..984027
Genome browser
AA seq
951 aa
AA seq
DB search
MRGEIINISLYIDTMDVWWGDNVLRLYLYSSYFVHIYRCSHTSFEQKVYSKMSVSLASRI
TFKRLCDVLEKVIKARASEKIKILKEFILQCKKEGDKLKKDDSNANISMFPVLRLLLPQC
DRKRSSYNLKQKLLTNIYIRVLCLGKSSEDAKKLINYRIPNSSKSEGSDISEIIYSVVRK
YLLHGKESYTIDRINIFLDNISKASQTNNNKDELFKELFRQISALELKWLTRIILKDLKL
GVGTKKILQVYHPKAGQCFDTNFNLEKLCDNFDQGKKEINYNIEVFSFFKSMNLERSTIK
DASQLFHNNHEYFVQMKFDGERSQIHMKDGIFQYFTRQGIDITNNWGYGKSNSDGFLTST
FSRRLNRQCTSIILDGELMGWDKEKKEFGSKGMSYDVKKLTANSSYQPCFVAYDIILYND
KLLVNLPYKERLNILNDAFQDEEGSLIKCQNTIISNSKDLLDIFNKSLQNNEEGIVLKKS
DFIYKPNVRNGTGCYKLKAEYSEDLVQDIDLIILGGYYGEGKFNGLINSFMMGVAKMPEI
EGKEPTQFFSVVSVCSGIAMEELTKLHSKLEKYWIKDCPNCVIKPKKHLPDLWIRPEHSL
ILTLRATEIVKTDVFPIGYTLRFPRVIQIRGDKPWYSVCTNTEFLSLIKTEGTIHKLTKR
TATLNDIETSVVEKKKKITMPTSSKFEEVFYNNIQSNKNLVPITRLLYGKEICVINGNNE
ISKENIEDKLLLHNAKIVQNPSEDTYCVIVGNVKKAKARNIIQSGKYDVVTIDWYKRIIK
KENWVALESFLPWDLLCIRDFTKRSLIEKYDDYYDSYTIDANEESLQRSLKRIEHMIKNE
EVVFTKEEGMDKELFENGISPFSIFKQIIGYFKKCSNSTKFKFRFMGGIIKEDINEHVNY
IFIEDNSLLSMKSLEVDETIKKSMKKVINSKWIKDCFRDQKFYSIDEYIVE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagaggggaaataatcaacataagcttatacatcgatacgatggacgtatggtgggga
gacaacgttctccgcttgtatttgtatagttcatattttgtccatatctatcgctgcagt
cacacatcctttgaacaaaaggtatattcaaagatgagtgtatcattagcttcaagaatt
acatttaaaagattgtgcgatgtcttagaaaaagttattaaagcacgtgcctccgaaaag
attaaaattctaaaagaatttattttgcaatgtaaaaaggaaggtgacaaattaaaaaaa
gacgattcaaatgcaaatatttcaatgtttcctgtgttaagattgcttttaccacaatgc
gatcgtaaacgttcatcatataatttgaagcaaaaattactaacaaatatttacattcgt
gtactttgtcttggaaaatctagtgaagatgccaaaaaactgataaattatagaattcct
aattcaagtaaatctgaaggaagtgacatttctgaaataatttactcagttgtgagaaaa
tatttgttacatgggaaggaatcgtatacaatagatagaataaatatatttttagacaat
atatcaaaagcaagtcaaacgaataataataaagatgaattatttaaggaattatttaga
caaataagcgcattagaattaaaatggttgactcgtattattttaaaggatctaaagtta
ggtgttggaacaaaaaaaatattgcaagtttatcatccaaaagcaggccaatgttttgat
acaaatttcaatttagaaaaactttgtgataattttgatcaaggtaaaaaggaaattaat
tataatattgaagttttctcttttttcaaatctatgaatttggaaagatctacaattaag
gatgcttcacaactttttcataataatcatgagtattttgtacaaatgaaatttgatggt
gaacgttctcaaatacatatgaaagatggtatattccaatacttcacaagacagggaatt
gatatcacaaataattggggatatggaaaaagtaattcagatggttttctcactagtaca
ttttcgcgtcgtttaaatcgacaatgtacgtctataattttggatggtgaattaatgggt
tgggataaagaaaaaaaagagtttgggtcaaaaggtatgagctatgatgttaaaaagctt
acagctaatagttcctatcaaccctgttttgtggcatatgatattatcttatataatgac
aaattgctcgttaatttaccctataaagaaagattaaatatattaaatgatgcatttcaa
gatgaagaaggttcattaattaaatgccaaaatacaatcatttctaatagtaaagattta
ttggatatttttaataaaagtcttcaaaataatgaagaaggaatagttctaaaaaaatct
gatttcatttataaaccaaatgttcgcaatggaactggttgctacaaattaaaagctgag
tactcagaagatctagtacaagatatagacttaattattcttggaggttattatggggaa
ggaaagttcaatggtttgataaatagctttatgatgggtgttgccaaaatgcctgaaatt
gaaggcaaagaacctacacaatttttctctgttgtatcagtgtgtagtggcattgcaatg
gaagaattgacgaaacttcattcaaaattggagaagtattggattaaagactgtccaaat
tgtgtgatcaaacctaagaaacatcttccagatttatggattcgacctgagcattcattg
attttaacgctacgagcaacggaaatagtgaaaactgatgtttttccgattggttatact
ttacgttttcctcgtgtcatacagattagaggagataagccttggtatagtgtttgtact
aacacagaatttttatcattgataaagactgaaggaacaattcataaattgactaaaaga
acggcgacattgaatgatattgaaacatcagttgttgaaaagaaaaagaaaataacaatg
ccgacttcgtcaaagtttgaagaagtgttttataataatatacaatcaaataaaaatctt
gtaccgattacacgtctattatatggaaaagaaatttgtgttattaatggtaataatgaa
atatctaaagaaaatatagaagataagctcttattgcataatgcgaaaatcgtacagaat
ccaagtgaagatacttattgtgtgatcgttggaaatgtcaaaaaggcgaaagcgagaaac
ataatacaaagtggaaaatatgatgtagttaccatagattggtataaacgtattatcaaa
aaagaaaactgggttgcattagaaagttttttaccatgggatcttttatgcattcgtgat
tttaccaaacgatcacttattgaaaaatacgatgattactatgacagttatacaatagat
gctaatgaagaaagtttacaacgttctttaaaacggatagaacatatgataaaaaacgaa
gaagttgtatttaccaaagaggaaggaatggataaagaattattcgaaaatggtatatcc
ccattttctatctttaaacaaattatcggatattttaagaaatgttcgaattcaacgaaa
tttaaatttcgctttatgggtggtataataaaagaagatataaatgaacacgttaattat
atcttcattgaagataattcattgttatctatgaaatctttggaagttgatgaaactata
aagaaatctatgaaaaaagtaatcaacagtaaatggataaaggattgttttcgggatcaa
aagttttattcgatcgatgaatatattgttgaataa
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