Vitis vinifera (wine grape): 100241010
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Entry
100241010 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100241010 isoform X2
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03008
Ribosome biogenesis in eukaryotes
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100241010
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100241010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100241010
03009 Ribosome biogenesis [BR:
vvi03009
]
100241010
Spliceosome [BR:
vvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100241010
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
100241010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
100241010
NCBI-ProteinID:
XP_002281586
UniProt:
F6HNR9
A0ABY9D0W8
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All DBs
Position
13:join(3995955..3995957,3996178..3996298,3996393..3996496,3998481..3998612,3998749..3998775)
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AA seq
128 aa
AA seq
DB search
MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFIVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgaagccgtgaatccgaaagcataccctctcgccgatgctcagctgactatt
acaattctcgatctcatccagcaagcagccaactacaaacagctcaaaaagggtgccaat
gaagctacgaagactcttaacagaggtatctcggagttcattgtaatggctgccgacact
gaacccctcgaaattctgctgcatcttcctttgcttgcggaggataaaaatgtgccctat
gtatttgtaccttcaaaacaagcacttggacgagcatgtggagtcacaaggccagtgatt
gcttgttctgtgacgagcaacgaaggaagccagttgaaatctcaaatacagcaacttaag
gatgccattgagaaactcttgatatag
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