Vitis vinifera (wine grape): 100247781
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Entry
100247781 CDS
T01084
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100247781
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100247781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100247781
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100247781
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tex55
Motif
Other DBs
NCBI-GeneID:
100247781
NCBI-ProteinID:
XP_010659764
UniProt:
F6I4I6
LinkDB
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Position
14:complement(join(332096..332167,333075..333584,333713..333778,334330..334395,334518..334622,334722..335952,336092..336171))
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AA seq
709 aa
AA seq
DB search
MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSF
PSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDE
SLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNA
SKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRL
PASTSGFSSTKTQKQDPGQTRNNSGLMNFSHFSRPAALVKANLQNIGAIAGPSSSSKDRI
GSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKTMEEPLPAE
QSPVICQEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKH
NLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINE
KMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHA
AHMGHFPPMGVGMGMGMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLH
GMVGSNLQVFGLPGQGIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASS
SKDLIQNVNSQVMQNNDANSSMASSQCQEQSALVQKNDQAPDVSHGEGV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctctgagctttatcgaatggctaaggggaaacccgaatcagtgcaacagaaa
acaaatgatctctcttttggacctgaaaacgattttgttgagctagtatgggaaggtggt
cagattatgatgcaaggtcagtccagtagagctaggaagagtcccttatctaacagtttt
ccatctcacacccctaagcctcgtgataaagatactggacatggcaccaattcaaagatg
ggaaagttcgggtcaatggattttatcttgaatgattttccattgtccgtgccatctgct
gaaatggggttgagtcaagacgatgatatggtaccttggttgaattatcccatcgatgaa
tctttacaacatgattattgttcagatttcttgcaagaattatccggtgtcactgtaaac
gagttatccactcattgcaattttgcatccggggagaagaggaatagtaataatcagaca
attaaagattccaataccatttctgcacataatggtgtgagtctagaacaagggaatgca
tctaaagcttctgcagcaggtgttgagcctagtaggccgagaagtagccagttatatccc
ccatcatcccagcagtgtcaaacgctatttccatctatgagatcaaaagtttcagatccc
atcagtaataacacaagcaatgctatgcaccatacagtttctggcaactccattcggctt
ccagcttccacaagtggtttttcgagcacaaagacccagaagcaagatccaggacagact
agaaataactctgggttgatgaacttctcccatttctcacgacctgcggctcttgttaaa
gctaatcttcagaacattggtgctattgctggtcctagttcatcaagcaaagatagaatt
ggaagtaaggataagcagcctgctgccagcagtagaaatcctgctgaatccagacatgtt
gattccagttgtggtttacagaaggatgtggattctcatagtgaacctgttatggtgcct
gcaagtgttgatttaaaaccggtggtggctaaaactatggaggaaccacttcctgctgag
caatccccagtcatttgccaagaaggtgcctgcaagaatgaaaaatcctccaaccaagtt
cttggtgcaagaactgctaaagggattccagatggtgaaaagactatagagccagcagtt
gcttgttcttctgtttgctcaggcaatagcgtggagagagcttcaaatgacccaaaacat
aatttaaagagaaaatgccgtgacacagaggagtctgaatgcccgagtgaagatgttgaa
gaagaatcagtgggtgtgagaaaatcagctcctgctaagggaggtacaggttctaagaga
agtcgagcagcagaagtgcataatttatccgaaaggaggagaagggacaggatcaacgag
aagatgcgtgcattacaagaactcatacccaactgcaataaggtggacaaagcatcaatg
cttgatgaagccattgagtacttgaaaacccttcaacttcaagtacagattatgtcaatg
ggaaccggattgtgcatgcctcccatgatgttgccgactggaatgcagcacatacatgca
gctcatatgggtcactttccacccatgggtgttggaatgggcatgggaatggggatgggt
tatgggatgggcatgcttgatatgaatggtggttctcccagttgcccctttattcaggca
cctccaatgcaaggaacacatttccctggtcgacctatttcggtccctcctaatttgcat
gggatggtgggatccaatcttcaagtatttgggcttcctggtcaaggaattcccttgtcg
atgcctcatgcaccattaattcctatgtctgggagtccccttatgaagtcttccatggca
ctgaatgactctggggcagcaggctctatggaagttcctgattctgctccagcctcaagt
tcaaaagatctgatacaaaatgtgaactcacaagtgatgcaaaacaatgatgccaatagc
tcaatggcatcaagtcagtgtcaggagcagtctgctttggtgcaaaaaaatgatcaagcc
ccagatgttagtcacggtgaaggtgtttga
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