Vitis vinifera (wine grape): 100249976
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Entry
100249976 CDS
T01084
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100249976
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
100249976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
Adaptin_N
TIP120
Motif
Other DBs
NCBI-GeneID:
100249976
NCBI-ProteinID:
XP_010653383
UniProt:
F6GXT0
LinkDB
All DBs
Position
8:join(10882103..10882771,10883741..10883821,10884520..10884783,10885157..10885348,10885888..10886028,10886387..10886476,10887400..10887914,10888448..10889366)
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AA seq
956 aa
AA seq
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MEQHLGSVCECILSLSTNDKRLNLRALASARSLIINSSTSDSTISALFETLTRFLQLTTE
PRALHHTLKLLSDIAFHHSRLSGLVFHSVRSYLLRSDSTRLSAESLAVLSSIAEHDRSLA
SAMDELDDRFFVSLCFGPSVSVRSWFLSNAFRFPIRPYVLLTVMLGFTKDPYPYVRRVAL
DGLVGLSKSSVIEDCGVIEGCYCRAVELLGDAEDSVRCAAVHAVSEWGKMLVASVQEMNK
RYWSDAVFVRLCSMVRDMSMEVRVAAFDALGKIGVVSEDILLQTLSKRVLGITKEKKPLG
QCSAKRKSLGQYIPKHFDIQACVAAGAFVHGLEDEFYEVRWSACHSLHTLTILSAKFAGE
ALNLLMDVLNDDSLNVRLRALETMHHMATCDHLKVQETHMHMFLGTLVDNSTFIRSTARK
ILRLMKLHDLKMFQSSIDGLLENLEVYPQDEADILSVLFDIGRNHGNFVVCIIKKFSQEI
EPSCEGRLDFDSVRVAALLVLAISAPLSEAQKVCSIPSRIFSYAVTLLGRISHALKDVMN
QNTLLAYLSHCSKSTIVDNSESFFPMIEGDIPNCSCIDMISPAGMSLQQGASENENQKRL
EPRKSATPLLDCQLEVHSEVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATY
MSDSLVSADTLAFTFQYLRVVKLLAKVWEHFLPPRKTQSYRIGELNLLLGKLDRNLKEMR
YRFRGLSKEEELHVLELILVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIEPY
NFVVELKKSLGEIDTYNDGASCRPFLLKRLLESFSLKQFRLSGSPKHIKAEIDLPGNDTE
PLPFISGLPVGIPLEITLYNVSSENRLWLRMIVHEQLMEFVFLDLNQSGGCDEVRKFTFM
APFYRTPKAMSLTLRVCIGMECLFEDVNLITDCGGPTRELVYICQEKEVYLGMIPW
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcacttagggagcgtctgtgaatgcattctcagtctctccacaaacgataag
cgtctgaatcttcgagccctagcttctgcaaggtctctcatcataaactcttcaacctct
gattctacaatctcggcactgttcgaaaccctaactcgttttctgcaactcaccaccgaa
cctcgcgctcttcaccacactctcaaacttctctccgacatcgccttccaccatagccgt
ctctctggcctcgtattccactcggtccgctcttacttactccgctccgactccactcgc
ctctccgccgaatcccttgccgtactctcctcaattgccgagcatgatcgttccttggct
tccgcgatggatgagctcgatgaccggttctttgtatcgctttgcttcggtccgtctgtg
tccgtgcggtcctggtttctctccaatgcattccggtttccaattcggccgtatgtgttg
cttacagtgatgctagggtttacgaaggatccgtatccttatgtgaggagagttgctttg
gatggcttggttggtttgagcaagtccagtgttattgaggattgtggcgtgattgaggga
tgctattgtcgtgctgttgagcttctaggtgatgcggaggattccgtaaggtgtgccgca
gttcatgctgtcagtgaatgggggaaaatgcttgtggcatccgtccaagagatgaataaa
agatattggtcagatgcagtatttgttcggctctgttctatggtaagagatatgagtatg
gaagtcagggttgcagcttttgatgcccttggaaagataggagttgtatcagaggatatt
ctgctacaaaccttatctaagagggtgctaggcatcacaaaagagaagaaacctctaggt
cagtgcagcgcaaaaagaaaatctcttggtcagtacattccaaaacattttgacatacag
gcatgtgttgctgctggagcttttgttcatgggcttgaggatgaattctatgaggtacga
tggtctgcctgtcattccttgcatacgctcacaatcctttcagcaaagtttgctggtgaa
gccttaaacctgttgatggatgtgctaaatgacgattcactgaatgtccgtttacgagct
ctggaaacaatgcatcatatggcaacatgtgaccatcttaaggttcaagaaacacacatg
cacatgttccttggtactctagttgacaacagtaccttcataagatctactgcaaggaaa
attcttcgactgatgaagctacatgatttaaagatgtttcaatcatctattgatggcctt
ctggaaaatttggaagtatatccacaggatgaagctgatatattatctgttttatttgat
attggacggaatcatggtaactttgtggtctgcatcatcaagaagttctctcaagagata
gagccatcatgtgaaggcagattggactttgatagtgtgagagttgctgcattgctagtg
ctggccatctcagctccactttcagaagctcagaaagtttgcagcattccatctagaatt
ttttcttatgcggttacactgctaggaaggatctctcatgctttgaaggatgtcatgaac
caaaatacccttttagcttacttgtctcactgcagtaaatccaccatagttgataactca
gagtcattttttcccatgattgaaggtgatattccaaattgttcctgcattgatatgatt
agtcctgctggcatgtccttgcagcagggggcctctgaaaatgaaaatcagaagaggtta
gagcccaggaagtcagcaactccacttttagattgccaacttgaggtgcacagtgaagta
gccaagtccataaagcttatccttttaaagattaatgatatctggttcttggtacaaaag
ggatgcatggctgaagtgctgaggatgttgaggagtttcagggaagaattggcaacatat
atgagtgactcacttgtatctgctgacacattagcctttacatttcaatatctccgggtt
gtgaaactgcttgccaaggtctgggagcactttctgcctccaagaaagacccagtcttat
agaattggagagttgaaccttttattgggaaaactggacaggaaccttaaagaaatgagg
tataggttcaggggattgagtaaagaagaggagttgcatgttttggagctgatacttgtg
acctgcattctgaggctgtctaaagttgaaatctgctgccataatgctaccttgaagaag
ttgtcgatgataatttctcatgcagagtttcttcacaaagaaggttctattgaaccttac
aattttgtcgtagaactcaagaaatcattgggtgaaattgacacatataatgatggagct
tcctgtaggccatttctgttgaagaggttacttgaatctttctccctcaagcagtttagg
ttgagcggaagtcccaagcacataaaggcagaaatagatcttcctggtaatgacactgaa
ccacttcctttcatttcaggattacctgttggtatacctcttgagatcactttatataat
gtttccagtgagaataggttgtggctgaggatgattgtacatgaacaattaatggagttt
gtctttttggatttaaaccaatctggaggctgtgatgaggtcaggaaattcacatttatg
gcacccttttacagaaccccaaaagcaatgtctctcactttgagggtatgcataggaatg
gaatgtttgtttgaggatgttaacttgatcactgattgtggtggcccaacaagggagctg
gtgtatatttgccaggaaaaagaagtttatcttggcatgattccatggtga
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integrated database retrieval system
