KEGG   Vitis vinifera (wine grape): 100250847
Entry
100250847         CDS       T01084                                 
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X2
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100250847
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vvi01007]
    100250847
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100250847
Enzymes [BR:vvi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     100250847
Amino acid related enzymes [BR:vvi01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   100250847
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    100250847
 Prokaryotic type
   Other AARSs
    100250847
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 100250847
NCBI-ProteinID: XP_002263182
UniProt: F6HYQ5
LinkDB
Position
5:complement(join(23600543..23600647,23600742..23600833,23600947..23601058,23601986..23602051,23602482..23602604,23602965..23603032,23603123..23603186,23604131..23604272,23604365..23604453,23605385..23605448,23605575..23605678,23605793..23605930,23606644..23606769,23607408..23607620,23607745..23607828,23607999..23608158,23608713..23608846,23610176..23610265,23611917..23612075,23612295..23612373,23612830..23612927,23613328..23613441,23615651..23615816,23627272..23627489,23628024..23628167,23628398..23628463,23631198..23631731))
AA seq 1183 aa
MEEVLESKDFSFPKQEENILELWSEIKAFETQLKRTENLPEYVFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDKKLGIQTREDVLKMGIDKYNEE
CRSIVTRYVEEWEKIITRTGRWIDFRNDYKTMDLKFMESVWWVFAQLFEKGLVYRGFKVM
PYSTGCKTPLSNFEANSNYKDVPDPELIVSFPIVDDPDKAAFLAWTTTPWTLPSNLALCV
NANFVYVKVRNKYSGKVYVVAESRLSELPTEKPKQVVTNGSSDDLKHSNPKSKGSSGGKT
KGEVEFEVVEKILGASLVGRKYEPLFNYFMEFSDAAFRVLSDNYVTDDSGTGIVHCAPAF
GEDDYRVCVENQIIDKGEDLIVAVDDDGCFTGRITDFSGRYVKDADKDIIEAIKRKGRLI
KSGRFTHSYPFCWRSDTPLIYRAVPSWFVKVENLKEQLLENNKQTYWVPDFVKEKRFHNW
LENARDWAISRSRFWGTPLPLWISEDGEEKIVMDSIEKLEKLSGVKVTDLHRHKIDHITI
PSSRGPEFGVLRRVDDVFDCWFESGSMPYAYIHYPFENFELFENNFPGHFVAEGLDQTRG
WFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPTEVIDEYGADALRLY
IINSPVVRAEPLRFKKEGVHGVVKGVFLPWYNAYRFLVQNARRLEVEGVGPFIPIDGVTL
QKSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLVKFLDYLTNTYVRFNRKRLKGR
TGEGDCRTALSTLYYVLLTSCKVMAPFTPFFTEVLYQNLRKVSNGSEESIHYCSFPQEEG
QRGERIEQSVARMTTIIDLARNIRERHNKPVKTPLREMVVVHPDQEFLDDIAGKLKEYVL
EELNIRSLVPCNDPLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSQEDILAFEKAGE
VTISNHCLKLTDIKVFRDFKRPENMTAEEIDASGDGDVVVILDLRPDESLFEAGIAREVV
NRIQKLRKKAALEPTDMVEVYFESLDEDLSAMQQVLDSQEVYIRDALGSPLLPSSMIQPH
TVILCEESFHGVSKFDFVIRLARPTLVFNTNAVLALYSGNTKFAQGLQAYLFSRDHYNLK
SEFQLGNSKIKVDCIENQPAVDVVLGKHVLLTVGDYYSSEKTE
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggaggaggttctcgagagcaaagacttctcatttccaaagcaggaagagaatatcctc
gagttatggtccgaaatcaaggccttcgagacccagttgaagcgcaccgaaaacctgccc
gagtacgtcttctacgacggccctcccttcgccactggcctcccccactatggccacatc
cttgccgggaccatcaaggacattgtgacgaggtaccagagcatgaccggccaccacgtg
acccgacgcttcggatgggactgccatggattgccggtggagcacgagattgacaagaag
ctggggattcagacgagggaggatgtgctgaagatgggaattgataagtacaatgaggaa
tgtaggagcattgtgactaggtacgttgaggagtgggagaagatcattacacgaacgggt
cggtggattgactttaggaatgattacaagaccatggatttaaagtttatggagagtgtg
tggtgggtttttgctcagctatttgagaagggccttgtgtacagaggtttcaaggttatg
ccatacagcactggttgcaagacaccgctgtctaattttgaagccaactcgaactataag
gatgtacccgaccccgaactgattgtgtccttcccaatagttgacgatccagataaagca
gcatttctagcatggacaacaacaccatggaccctccctagtaatcttgccttgtgtgtc
aatgcaaattttgtctatgtaaaggtgcgcaataagtactcagggaaagtctatgtggtt
gctgaatctcgattgtcagagctacctactgagaagccaaaacaagtcgtaactaatgga
tcaagtgatgatctaaaacattcaaaccctaagtccaagggttcctcaggtgggaaaacc
aagggtgaggtagagtttgaagtggttgagaaaattttgggggcttcactggtgggaagg
aagtatgagccattattcaattatttcatggagttttctgatgcggcattcagagttctt
tcggacaattatgtaactgatgatagtgggactggaattgttcattgtgctcctgcattt
ggtgaagatgattaccgggtttgcgttgaaaatcaaataatcgataagggagaagatcta
attgtagcagttgatgatgatggctgctttactgggaggattactgactttagtgggcgt
tatgtgaaggatgcagataaagacattatcgaagcaataaagagaaaaggcaggctcatc
aaatctggcagatttacgcattcttatccgttttgttggagatctgatacccctcttatt
tatagagctgttccgagctggtttgtcaaagtggaaaacttgaaggagcaattgctagaa
aacaacaaacagacatattgggttcctgattttgtgaaggaaaaacgcttccacaattgg
ctggaaaatgcaagagactgggctatcagtcgaagtagattctggggtactcctcttcct
ctatggattagtgaggatggtgaagaaaaaatagttatggattccatcgagaaactagaa
aagctctctggtgtgaaggtgactgatctgcatcgtcacaagattgatcatatcacaatt
ccttctagtcgtggtcctgaattcggtgtgcttcgacgtgtagatgatgtgtttgattgc
tggtttgagagcgggtccatgccttatgcttatattcattatccatttgagaattttgaa
ctttttgaaaataatttccctgggcattttgtggctgaggggctagatcaaactcgtgga
tggttctatactctcatggtgttgtctactgcattatttggaaaacctgcatttaggaat
cttatttgcaatggacttgtcctggctgaggatggaaaaaaaatgagtaaaagattgaag
aactatccttcacctacagaagtcattgatgaatatggggctgatgcattgcggttatac
attatcaattctccagttgtgcgtgcagagcctttacgtttcaaaaaagaaggagttcat
ggtgttgtcaagggggtctttctcccttggtataatgcatacaggttccttgtacagaat
gcaaggagacttgaggttgagggggttggaccattcattcctattgatggggttactctt
cagaaatcatctaatgtgcttgatcaatggatcaattcagccactcagagccttgttcat
tttgtccgccaagaaatggatgcatatcgactttacacggtggttccttatcttgtgaaa
ttccttgactacctcacaaatacatatgtgcggttcaaccgtaagagacttaaaggccgt
acaggagaaggcgactgccggacagctttgtcaactctttactatgtgcttttaacttcg
tgcaaagtaatggctccattcacaccgttcttcactgaagttctttatcaaaatttacgg
aaagtttccaatggatcagaggaaagcattcactattgcagtttccctcaagaagaggga
cagagaggagaacgaattgaacaaagtgttgcaaggatgacaactataattgatcttgct
cgcaatattcgtgagcgtcacaataagcccgtgaaaacaccactcagggagatggtagtt
gttcatccagaccaagaatttcttgacgacatcgctggaaagctaaaagagtatgtgctg
gaggaactcaatattagatctcttgtcccctgcaatgatcctttgaaatatgcttcttta
cgcgcagaacctgatttcagcgtattaggtaagcgtctggggaaatcgatgggagttgtt
gccaaggaagtcaaagcaatgtcccaggaagatattttggcttttgaaaaggctggagaa
gttacaatttctaaccattgtttgaagctgactgatattaaggtttttcgggatttcaaa
cgtcctgaaaatatgactgcagaggagattgatgcatcaggagatggtgatgttgtggtg
attctggatttgcgacctgatgagtcattgtttgaggcggggattgctcgtgaggtcgtt
aatagaatccagaaattacggaagaaggctgcccttgaacctaccgacatggttgaggtt
tattttgaatctttggatgaagatttatcagctatgcaacaagttttagattcacaggaa
gtctacattagagatgcacttggttctcctttgcttccttcctccatgattcagccgcat
actgtcatcctttgcgaggagagtttccatggtgtctctaaatttgattttgttattagg
ttggcaaggccaacattagtattcaacacgaatgctgttcttgctttatattcaggaaac
acaaagtttgcacaaggtttgcaggcttacttgttttcaagggatcattataacttgaag
tcagagtttcaacttggaaattccaagattaaggttgattgcattgaaaatcagccagca
gtggatgtggtattgggaaagcatgtacttttgacggtcggcgattactattcgagtgag
aaaaccgaatga

DBGET integrated database retrieval system