Vitis vinifera (wine grape): 100252442
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Entry
100252442 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100252442 isoform X2
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03008
Ribosome biogenesis in eukaryotes
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100252442
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100252442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100252442
03009 Ribosome biogenesis [BR:
vvi03009
]
100252442
Spliceosome [BR:
vvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100252442
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
100252442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
100252442
NCBI-ProteinID:
XP_002285133
UniProt:
A0A438C0R9
F6HH82
LinkDB
All DBs
Position
11:join(4398306..4398308,4398406..4398532,4398616..4398719,4400268..4400399,4400504..4400530)
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AA seq
130 aa
AA seq
DB search
MTGAGEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAA
DTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQ
LKDAIEKLLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgcaggtgaagcagtaaatccaaaagcatacccacttgcggatgcgcaactc
accataactattctggatctcattcaacaagctgccaactacaagcagctcaaaaagggc
gctaatgaagcaaccaaaaccctcaataggggtatctctgagttcgtagttatggctgct
gacacggagccccttgaaatcctactccatcttcctttgcttgctgaggataagaatgtg
ccttatgtatttgtcccttcaaagcaagcacttggccgtgcatgtggagtcacaaggcct
gtcattgcctgttcggtgactagcaatgagggaagccaactgaaatctcaaatacaacaa
ctcaaggatgccattgagaagctcttgatctga
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