Vitis vinifera (wine grape): 100253874
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Entry
100253874 CDS
T01084
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100253874
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100253874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100253874
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100253874
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
100253874
NCBI-ProteinID:
XP_019076835
LinkDB
All DBs
Position
7:complement(join(5247321..5247719,5247807..5247872,5247955..5248020,5248136..5248243,5248351..5249421))
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AA seq
569 aa
AA seq
DB search
MSDRDFVELVWENGQILTRVLSSTGSHENHRWSSFSLHDSKAQVEVGWDTSMVKRGRLLD
KEFPGHTKMDPHPNYTRQDSLKKHCHTELLAKFSGSILNDEVAYTISGHDEQLVPSADNQ
NFKQGNACNLFSGEPQLTRPKGGQICESSLQQWQASSPYIRSREGSSKIPVSTSGLSNSM
MRQPEQEQDADPDNRMGSMNFSYFLKLAALDKAKAQNIDAARATTSPGLSRLKESKSDYA
NGTNPFRLRPIGPPTGSVTPKLLPQPVASSLKEPLSNGHCKAVGHEVAFGNTASANQIPK
PNSSFAASIVKGKPYAEKSVEPLLASSSTCSREASNYPSYSLKSKCQESEESEHPSQSFE
EEPRRAEGAMSTRGGSAGSKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKIS
ILDEAIDYLKTLQLQVQVMSMGAGMCMAPVMIPAVLQQIQAAHLPHFSPMGMGMGMGMGM
GLGLGLGLGLGCSPEQFPSPPILGAAALSGIAGTAPQMLGHPGQVLPMSLSSAPFIPLHA
GSLTQSVLVPSVPKDIHPVEHPGSSPSSN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgtgattttgtggagcttgtatgggagaatggtcagattcttacaagagtt
ctgtccagtactggatctcatgagaatcacagatggtccagtttttctttacatgattct
aaggctcaagtggaagtaggatgggacacctccatggtaaagagaggaaggttattggac
aaggaatttcctggacataccaagatggatccccatcccaactatacccgtcaggattct
cttaaaaagcactgccatactgaactattggccaaattctcaggttccattctaaacgat
gaggttgcctacaccattagtggtcatgatgaacaacttgttccttcagctgacaatcag
aattttaaacaaggcaatgcatgtaaccttttcagtggagaacctcagcttactagaccc
aaaggtggccaaatatgtgagtcttctttgcaacaatggcaagcttcatctccatatata
agatcaagggagggttcaagtaagatcccagtatcaaccagtggattgtctaactcgatg
atgcggcagccagagcaggagcaggatgctgaccccgataacagaatgggttcgatgaac
ttctcctatttcttaaaacttgcagctctcgataaagccaaggctcagaacattgatgct
gcaagagccacaaccagcccaggcttgtcaagacttaaggagtcgaaaagtgactatgct
aatggcaccaaccccttcagattgaggccaattgggcccccaaccggttcagtgaccccc
aaactgttgccacaaccagttgcttcgtctttaaaggaaccactctctaatgggcattgt
aaagcagttggtcatgaagttgcctttgggaatactgcatccgctaatcagattcctaag
cccaactcaagcttcgcagcaagcatagtcaagggaaagccttacgctgaaaaatctgta
gaaccattgcttgcatcttcgtctacatgctcacgtgaagcttcaaattatccatcctat
tctttgaagagcaaatgccaagagtctgaggaatcagaacatccaagtcaaagttttgaa
gaagaacccagaagggcagaaggagcaatgtctactcgaggaggaagtgcaggctccaag
agaaaccgtagtgcagaaggtcacagcctatcagaaaagaggcgaagagataggatcaac
aagaagatgcgctcgttacaggaactcatacccaattgcaaaaaggtggacaagatttcg
atacttgatgaagccattgattatctgaagacacttcagcttcaagtgcaggtcatgtca
atgggagctgggatgtgtatggctccagtgatgatacctgctgtattgcaacagattcaa
gcagcacatttgcctcatttctctcccatgggtatgggaatgggcatgggcatgggcatg
ggattgggattgggattgggattgggattgggctgcagcccagaacagttcccaagtcca
cctattttgggagccgctgctttgtctggaatagcaggaactgcacctcagatgcttggg
cacccaggtcaagtgcttcccatgtcattatcaagtgcacccttcattcctttacacgca
gggtcattgacacagtcagttctagtgcccagtgtccccaaggatatccacccagtagag
catccgggttcttctccatcttcgaattga
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integrated database retrieval system
