KEGG   Vitis vinifera (wine grape): 100257083
Entry
100257083         CDS       T01084                                 
Name
(RefSeq) putative DNA glycosylase At3g47830 isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100257083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100257083
Enzymes [BR:vvi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     100257083
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     100257083
 Prokaryotic type
     100257083
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 100257083
NCBI-ProteinID: XP_002283633
UniProt: F6GSV1
LinkDB
Position
17:join(9103679..9104101,9104454..9104654,9126862..9126918,9126985..9127236)
AA seq 310 aa
MQRSRKRKQEESSSCSKESATKSARNDVVVDPYPSHPRPTPVECRAVRDDLLALHGFPQR
FEKYRKLRLPPLPHTSSPGLDGGGGTPVKLDPSDGDDVNGSSQKESVLDGLVSIILSQNT
TDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVTKASCIKKMLSCLLERKGK
LCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQIGKAIGWVPA
VADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESHESSCPLLTYC
GDMFKSSSPN
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcagaggagccgcaagcgaaagcaagaggagtcgtcatcatgctcaaaggaatctgca
accaaatcagcccgaaacgacgtcgtcgtcgacccctacccatctcacccgcgacccacc
cctgtagaatgtcgggccgtgcgggacgacctcttggccctccatggttttccccaacga
ttcgagaagtaccgcaagctcaggctgccccctcttccccacacctcttctccagggctc
gacggcggtggcggaactccggttaagttggacccgtctgacggcgatgacgtgaatggg
tcctctcagaaggaaagcgttttggatggcttggtcagcatcatactctcacagaataca
acagatgttaattctcaaagggctttcgcttctctcaagtctgcttttcccacctggcaa
gatgttcttgctgctgactccaaaagcatagagaatgccataagatgtggcggtttggct
gtgactaaggcttcttgtatcaagaaaatgctgagctgtttgctggagagaaaaggcaaa
ttatgccttgagtacttgcgagatttaacagttgatgaaatcaagacagagctttctcat
ttcaagggtattggccccaaaacggttgcatgtgttttaatgttccatcttcagcgagat
gattttcctgtggacacacatgtaatccagattgggaaggccattggttgggttcccgca
gtggcagacaggaaaaaggcatatcttcatctcaaccgacggatcccggatgagctaaaa
tttgaccttaactgtcttcttttcacacatggcaaactctgccatgaatgtacccaaaaa
ggggccaaccagaaaagaaaggaatcccatgagagctcttgtcctctgttaacttactgt
ggtgatatgtttaaatccagcagccccaattga

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