KEGG   Vitis vinifera (wine grape): 100257580
Entry
100257580         CDS       T01084                                 
Name
(RefSeq) nuclear pore complex protein GP210
  KO
K14314  nuclear pore complex protein Nup210
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100257580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100257580
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100257580
SSDB
Motif
Pfam: Ig_GP210_15th Ig_GP210_16th RRM_1 Ig_NUP210_1st Ig_NUP210_7th Big_2 RRM_7 Ig_NUP210_5th Ig_NUP210_2nd Ig_NUP210_3rd RRM_PARP14_3 Ig_NUP210_16th Invasin_D4 Ig_NUP210_15th SF3a60_bindingd
Other DBs
NCBI-GeneID: 100257580
NCBI-ProteinID: XP_059598646
LinkDB
Position
14:complement(join(27191343..27191876,27193776..27193945,27194101..27194196,27194809..27194976,27195066..27195102,27197388..27197390,27197662..27197993,27198066..27198126,27198400..27198491,27198982..27199048,27199372..27199588,27199680..27199766,27200232..27200373,27200552..27200659,27201904..27201979,27202747..27202818,27203071..27203183,27203279..27203381,27205335..27205743,27206023..27206156,27206275..27206337,27206418..27206573,27213310..27213429,27213676..27213795,27213907..27214056,27214327..27214395,27214466..27214525,27223587..27223778,27224227..27224289,27224466..27224576,27240143..27240420,27240529..27240652,27240779..27241371,27241460..27241571,27245388..27245536,27245611..27245749,27245896..27246075,27248838..27249184,27263452..27263668,27263762..27263928,27264844..27265109,27265852..27266036))
AA seq 2293 aa
MGLNMFRWDFLFVFLVIQMPVISTTPHLGSGPHIADVNILLPPKMTYPVEYLLQGSGGCF
KWSWDHHDILSVLPEYNVSSQCSTSARLKSIATYNGRKETAVYAADIHTGIVVRCKVFID
NISRIQIFHNSIKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLRPETDGLPPHLVHV
PLKDSPLSDCGGLCGDLSVQIKLEDGGAFSDLYVVKGIGIGHEVVSVHLLEPQFEHMADK
IVLTVAEAMSLDPPSPVFILIGAAVRYTLKVIRGNIPQVVALPSPYHRWSVLNSSVAQVD
SQMGLVNVLSLGVTTVTVEDTRVAGHIQMSSLHVVLPDTLCLYILPLSLSDDPLEGAKSI
PSGARWYAFSGQQYLIQMKVFSGGPGGQEVYITESDEVSLQYNQSIYWKAFLVSDRIAVK
HDWWNSRILKMTSEGLGNLTASLSYFSGQPGRKEVLKVVQEVMVCEKVKFSFDKRSAVSE
RILLPWAPAVYQEVDLKATGGCAKSSSDYKWFSSDMATVSVSASGVIQAKKPGKAAVKVV
SIFDPFNYDEVVVEVALPSSMVMLQNFPVETVVGSQLQAAVTMKASNGAYFYRCDAFSSF
VRWKAGSESFIIVNATGETPVLDKLESVEPYASVYGPPCAWTYVYASSAGRAMLHATLTK
EYQHHDHPFHGPIVLQASSRIGAYLPLVLRQAGDGNQFGGYWINTAQAEAHSQFENLDDL
FLVPGTHLDVMLVGGPEWWDKSVDFNETVDILDEHARLKDGVLVHEVSSSYGSLYRVLCQ
ILGTYKIAFKRGNLVGDDHPLPAVAEVELSLTCSFPSSITLIADEPVNEPGVIWAATQAD
RNPERIRVTPITVANGRTIRIAAVGISNSGKAFANSSSLCLKWELSNCDALAFWDDSYDL
GGSSSGWERFLILQNESRLCIVRATVIGFAGTVSGHVSAPLLESSENVLTDAVRLQLVSS
LRVTPEFKLLFFNSDAKANLSITGGSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGL
GTALVTVYDIGLAPHLSASSVVQVADVDWIRITSGEEISLMEGSVQSIIVMAGVDDGSTF
DASQYVYMNIQVHIEDHIVDLVDDDNDISSIGGGYVNSPKFMILAKHLGVTILYVSARQA
SGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGVVIEYASLDDRIATVN
KSSGRLSAISPGNSTLVATVYGKGDTVICQAYGRIKVGVPSLVTLNVQSEQLDVGREMPI
FPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPGHLDE
KDLGFINMLYGRSAGRTTVAVSFNCDFISSGHSQSRSYSASMSISVVSELPLAFGVPITW
VLPPYYTTSSLLPSSSESYGQWDLSRKGTITYSLLRSCGGKNEEVQKDAISIDRDRIKTT
ESNNLACIQAKDRTTGKTGIASCVRVAEVAQIRITPQKFSFHVIDLAVDAEVKLPINFCD
VLGNPFHEAFNVIPLDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALLRVSINSSPHKS
DYVLVSVGAYLSPRNPVLHLGGHLNFSIEGLKDKVSGQWLSGNESVISLDVLSGEAQAVG
EGTTQVFFECSSLKLQTTVTVQKGKIVLVDAPMETLTNAPIPAKGYNFSVKFSSDTYGHD
LEGFRNDMGVLFDCRVDPPFVGYAKPWRDFGTGKSYCLFFPYSPEHLARSVPKSKDMRPY
ISLSISASVQETNHVSGSASALFVGGFSILEMGKNLVQLNLTAGSNKTIITILGNTDVDI
HWHERDSIMISPVHKEDFGIGGLAKYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPG
ERAYSVSTVKVTLWAGVVGCIALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTPDR
RSPAVQNDSSPRTPQPFVEYVRRTIHETPYYTREGRRRKIFIGGLARETTSAQFIKHFGK
YGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPKGAIGA
KDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAV
DDLLSQGNKLELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRPGFGGGFGDAYAGFGGSSF
GNGPYRSGGAYGSRASAYAGYGGSEFGGYGGYGGGGSSGGGGGIGTYRGEPPSLGYSGRY
GGSFNRGYDLGGSHGGPSEGYGAYGGGAGSGYGGGYDASIGGGYGGSSGGPFYGSRGGYG
GGGSSGRYHPYGR
NT seq 6882 nt   +upstreamnt  +downstreamnt
atgggcctcaatatgtttcgctgggatttcctcttcgtttttcttgtcattcagatgcct
gtgatcagtacgacgccgcatttggggtctggtcctcacatagctgatgtcaatattctg
ttgcctcccaaaatgacttatcccgttgagtatcttcttcaaggaagtggcggttgcttc
aaatggtcatgggatcatcatgatattttatctgttctacctgaatataatgtaagcagt
caatgttcaacaagtgccaggctgaaatccattgctacttataacggtcgaaaagagact
gctgtttatgctgccgacatacacactgggattgtagttcgttgcaaagtttttattgat
aatatatccaggatccagatatttcataactctattaaacttgacttagatgggcttgct
actctccgtgttcgtgcctttgatagtgaagaaaatgtgttctcatcattagtgggctta
cagttcatgtggcagctgaggcctgaaactgatggattgcctcctcaccttgtccacgtt
cctttaaaggattctcccttgagtgactgtggtggattatgtggggacctaagtgttcaa
ataaaacttgaagatggtggtgcgttttctgatttgtatgtggtaaaaggaattggaatt
ggccacgaggttgtttctgtgcatttgctggagccacaatttgagcacatggctgataag
attgttttaaccgtagcagaagccatgtcacttgatcctccctcacctgttttcattctc
attggtgctgctgttcgctatactttgaaagtcattcgggggaatattcctcaagtggtt
gctttaccatctccatatcacagatggtctgttttgaactcctcagttgctcaagtggat
tctcagatgggtctagtcaatgtgctgagcttaggagtgaccactgtcactgttgaagac
accagagttgctggccacatacaaatgtcatctctccatgttgtcttgcctgatacttta
tgtttgtacatattacctctatctctttctgatgatcctttagaaggagcaaaatctatt
ccatctggggcacgctggtatgcgttttctggtcaacaatatctcattcaaatgaaggtt
ttttcaggaggacctggtggccaagaagtttatattactgagagtgatgaagtgagcttg
caatacaaccaatctatatactggaaggctttcttggtgtcagataggattgctgtcaag
catgactggtggaattccagaatcttgaaaatgacatcagagggactgggaaatttgaca
gcttctttaagttattttagtgggcagcctggaagaaaggaggttctcaaggttgttcaa
gaagtcatggtttgtgaaaaagtgaaattcagcttcgacaaaagaagtgctgtttctgaa
aggattctccttccctgggctcctgctgtttatcaggaggtggacctaaaggctactgga
ggttgtgcaaaatcatccagtgattataaatggttttcttcagacatggctactgtctct
gtatctgcttctggtgttattcaggcaaagaagcctggtaaagctgctgttaaagtagtt
tcaatttttgatccattcaattatgatgaggtggttgttgaagttgctctcccttcatct
atggttatgctgcaaaactttcctgtagagactgttgtaggatcacaacttcaagctgct
gtgacaatgaaagcatcaaatggtgcctatttctacagatgtgatgctttcagttcattt
gtaaggtggaaagctggaagtgagtctttcataattgtcaatgcaacaggggagactcct
gtcctggacaagctggaaagtgttgagccttatgcatcagtatatggtcctccatgtgca
tggacgtatgtatatgcttctagcgctggtcgagctatgctgcatgcaacgctgaccaaa
gaatatcaacaccatgatcatcctttccatggccctattgttttacaagcatcttcacgt
ataggagcctatctgccacttgttttgcgtcaggcaggtgacggaaaccaatttggtggt
tactggatcaataccgctcaagcagaagctcatagtcagttcgaaaatttggatgatttg
tttcttgttcctggaacacatttagatgtcatgcttgttggaggacctgaatggtgggac
aaaagtgttgactttaatgaaactgtggatattttagatgagcatgctcgtcttaaagat
ggagttcttgtgcatgaagtatctagcagctatgggagtttgtatagagttttatgccaa
attttaggaacctataaaattgctttcaaacgtggtaacttggttggagatgaccatcct
ctgccagcagtagcagaagtggaattgtcacttacatgtagctttccttcatctatcaca
ctaattgctgatgaacctgtgaatgaacctggtgttatatgggctgcgactcaagctgat
cgcaatccagagcgaattcgtgtcacccctattactgtggcaaatgggcgcacaattcga
attgctgcagttggaattagtaactcaggaaaagcttttgcaaattcatcttctctttgt
ttgaagtgggaattgagcaattgtgatgcactggcgttttgggatgattcctatgattta
ggagggtccagttccggttgggagaggtttttgatcttgcaaaatgaatccagactgtgc
attgttcgtgcaactgttatcggttttgctggtaccgtgagtggtcatgtatctgctccg
ctgcttgagagctcagagaatgttcttacagatgctgtacgcttacagcttgtttcttct
ctaagagttaccccagagttcaagttattatttttcaattcagatgctaaggcaaatctc
tcaattactggaggaagctgttttctggatgctgttgtgaatgattctcgagtagtagat
gtgattcagccccctccaggtttacaatgcttacagttgattgttgctcctaaagggttg
ggtactgcacttgtgacagtttatgatattggtcttgctcctcacctttcagcttcttct
gtggttcaagttgcagatgttgattggataaggattacctcgggagaagagataagcctc
atggaaggaagtgtacaatctattattgtgatggctggagttgatgatggaagcactttt
gatgcttctcagtatgtttacatgaatattcaggttcatattgaggaccatatagttgat
ctcgtggatgatgataatgatatctcaagtattggtggtggatatgttaactccccaaag
tttatgattttggctaaacatcttggtgttacaattctctatgtcagtgctagacaggca
tctggatatgaaatagcgagtaatcaaattaaggtggaagtctatgcaccaccaagaata
catcctcctgatattttcctggttccaggtgcagcttatgtgcttaatgtgaaaggaggg
ccacaaattggtgtagttatagagtatgctagtttggatgatcggattgcaactgtcaac
aaatcttccggacggctgtctgcaatttcacctgggaattctaccttagttgccacagtt
tatggtaagggagatactgttatttgccaagcatatggcagaattaaagtaggagtccct
tctttggtgacattgaatgtacagagcgagcaacttgatgttggccgtgagatgccaatc
tttccatcattgccccagggtgatttgttttccttttatgagctctgcaagaattacaag
tggactgtagaagatgaaaaggttttgagtttccatatggcagagcacattcgtggtgac
agatatgggcttccttcttctggttcaaaggaaattaaactccctgggcatttggatgag
aaggaccttggatttatcaatatgttgtatggaagatcagcaggcaggacaactgttgca
gtttcattcaattgtgattttatttcttctggccattcacagtcaaggtcttacagtgcg
tctatgtcgatatcagtggtctctgagcttcctcttgcttttggggttcccattacctgg
gttcttcctccctattatactacatcaagtcttttgccttcctcatcggaatcatatggg
caatgggatttgagtcgcaaaggaactattacttattctttattgagaagttgtggtggt
aagaatgaagaggtgcagaaggatgctatttcaattgacagggatagaattaaaacaaca
gagagcaataatcttgcgtgcattcaggcaaaagatcgcactactggaaaaacagggatt
gcttcttgtgttagggttgctgaggtggctcaaataagaataaccccccaaaagttctca
ttccatgtcattgatcttgctgttgatgctgaagtgaaacttccaataaacttttgtgat
gtgctaggaaaccctttccatgaagcatttaatgtgattcccttggatgctgaaactaat
tatcctgatattgtctccattaatagcacaggtgatggctatgggaatatccatctcaag
ggcatacgccatggtagggctctgctgcgagtatcaattaacagtagtccacataaatct
gactatgtgctggtctcagttggtgcttatttatctcctcggaaccccgtccttcacctt
ggaggtcatctcaacttcagcatagaaggattaaaagataaagtatctggccagtggttg
agtggcaatgaaagtgttatatctctagatgtactatctggagaagctcaagcagttggg
gaaggtacaacacaagtgttctttgaatgttcaagtttgaagctgcagacaacagttaca
gtgcaaaaggggaagattgttcttgttgatgctccaatggagaccttaacaaatgcccct
atccctgcaaaaggatataatttctctgtgaagttcagtagtgatacctatggccatgat
ctagaaggcttcaggaatgatatgggtgtcctctttgactgtagggtggatccacctttt
gtcgggtatgcaaaaccctggagggattttggcactggtaaatcatattgcctcttcttt
ccttactctccagagcatctggcacggtctgttccgaagtcaaaggacatgagaccatat
atttctctttccatcagtgcttcagtgcaagaaaccaaccatgtctcaggatctgcatcg
gccctttttgttggtgggttttccatcttggaaatgggcaagaatttagtgcagttgaat
ttgacagcaggctccaacaagaccataataaccattttggggaatacagatgttgatatc
cactggcatgagcgggattctataatgatcagtcctgtgcataaagaagactttgggatt
ggtgggcttgcaaaatatgaggtcaaagtgctacaggccaagaaattcaaagataaagtg
gtgatcacactcccagccaatggccaaagagttgaactagatgtaagctacgatccagga
gaaagggcatactcagtatccactgtgaaagtaacactatgggcaggcgtggttggttgt
attgctttgttgctattgactctggccatcttcatattcttcttggacaggcctgacaga
gctcggccatccaaccctccagccaattcaagcattgtagcacccacaacgcctgatcga
aggagtccagctgttcagaacgattcctctcctcgaacacctcagcctttcgtagagtac
gtgaggaggacgatccatgaaactccttattacacacgagaaggaaggaggagaaagatt
tttattggaggcttggcaagagagacgacttctgcacaatttatcaagcattttggtaaa
tatggtgaaattacggattctgtgataatgaaggatcggaaaactggacaacctcgtggg
tttgggttcgtgacttacgcagacctgtctgtggttgaccaagtcatccaagacacccat
gtcattaatgggaaacaagtagaaatcaagcggaccataccaaagggagccattggtgct
aaggatttcaaaactaaaaagatctttgtgggtggaattccagcaacagtgactgaagag
gagttcaaggacttcttcacacaatatggagaggttaaggaccaccagattatgcgagat
cattccaccagtcgttcacgtggttttggatttgttacatttgacacagagcaagctgtg
gatgatctcttgtcccaggggaacaagcttgagctggctggagctcaggtggagatcaag
aaagcagaaccaaagaagccaaacccaccagtgcccccatccaggcgatattcggattct
agacctggctttggtgggggctttggagatgcttatgctggctttggaggcagcagtttt
ggtaatggtccttataggtcaggtggggcctatgggagtagagccagtgcctatgcggga
tatggtggaagtgaatttggcggatatggaggatatggtggtggcggcagcagcggcggc
ggcggcggcataggaacttacagaggagaacccccatcattagggtactcaggtcgttat
gggggaagcttcaatagaggttacgatctgggaggtagccatggtgggcctagcgagggc
tatggggcatatggcggtggagctggcagcggctatggaggtggctatgatgccagcatt
ggtggtggctatggaggtagcagtggaggtcccttctatggaagtagagggggttatggt
ggtggagggagtagtggccggtatcatccctatggaaggtag

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