KEGG   Vitis vinifera (wine grape): 100259489
Entry
100259489         CDS       T01084                                 
Name
(RefSeq) RING-box protein 1a isoform X2
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03420  Nucleotide excision repair
vvi04120  Ubiquitin mediated proteolysis
vvi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100259489
   04120 Ubiquitin mediated proteolysis
    100259489
  09124 Replication and repair
   03420 Nucleotide excision repair
    100259489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100259489
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100259489
Enzymes [BR:vvi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     100259489
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100259489
  Multi subunit type E3
   SCF complex
    Ring finger protein
     100259489
   Cul2 complex
     100259489
   Cul3 complex
     100259489
   Cul4 complex
     100259489
   Cul7 complex
     100259489
   Cul8 complex
     100259489
   Cul9 complex
     100259489
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100259489
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100259489
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 100259489
NCBI-ProteinID: XP_002278332
UniProt: A5ARK4
LinkDB
Position
11:complement(join(827688..827725,827829..827900,830291..830350,830470..830520,830632..830773))
AA seq 120 aa
MASLDSDVTMVPVGEPSGSAGPSSSSSCKKPKRFEIKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atggcctcactggactctgacgtcaccatggtccccgtcggcgagccttccggcagcgcc
ggtccttcctcctcctcctcctgcaagaagcctaagcgctttgaaatcaagaagtggaac
gctgttgccctttgggcttgggatattgttgttgataactgtgcgatctgccggaaccat
attatggatctatgcatcgagtgtcaagctaaccaagctagtgccacgagcgaggaatgc
accgtagcttggggggtttgcaatcatgcatttcacttccactgcatcagccgatggctc
aagacccgtcaagtgtgcccgctggataacagcgaatgggagttccagaagtacggtcat
tag

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