Vitis vinifera (wine grape): 100262490
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Entry
100262490 CDS
T01084
Name
(RefSeq) transcription factor PIF4 isoform X2
KO
K16189
phytochrome-interacting factor
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100262490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100262490
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100262490
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100262490
NCBI-ProteinID:
XP_002278399
UniProt:
A0ABY9CV67
LinkDB
All DBs
Position
12:join(1666951..1667024,1667128..1667998,1668087..1668185,1668262..1668327,1668627..1668692,1668777..1669076,1669173..1669287,1669676..1669680)
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AA seq
531 aa
AA seq
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MNHPLLPDWNIEGDVPVTNQKKPMGQEHELVELLWRNGQVVLHSQTQRKSGLAPNESKQV
QKHDQTMLRNGGSCGNWSNLIQDEESISWIQYPLDDSLDKEFCSNLFMELPPNDPVQPEK
PVRHSEQEKSVPSSQQPIFKHLGSPEFPGNPMPPPKFQVPGSVQQNCSSGGFGKIVNFPN
FSFPGRSNLGSSKAQLGGKGSGNMAQGGDAKEGSVMTVGLSHCGSNQVVNEADLSRFSSS
GVGTGCLSSGHVKENVMRIVSQGDRRQTETLEPTVTSSSGGGSGSSFGRTYKQSTDTNSH
KRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINEKMKA
LQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAPMMFPGVQHYMARMGMGMC
PPPLPSIHNPMHLPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQNQMPNPNFPEQFAH
YMGFHPMQTPSQPMNVFSFGSQSHPMASPATTGGTPTAAAAVDGAPGSKLG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacccccttcttccagattggaatattgaaggcgatgtccctgtaaccaatcag
aagaaacccatggggcaagagcatgagcttgtagagctcttatggcgaaatgggcaggtg
gtattgcacagccaaacacagagaaaatccggtcttgctccaaatgagtctaaacaagtt
cagaaacatgatcaaaccatgctaaggaatggtgggtcatgtgggaattggagtaatttg
attcaggatgaggagtcaatctcatggatccaatacccactggacgattcccttgacaag
gagttctgttctaatttgttcatggaattgccgcccaatgatccagttcagcctgaaaag
cctgttagacactctgaacaagaaaagtctgtccccagctcacaacaacctatttttaag
catttgggtagtcctgaattcccaggaaacccaatgccgccgcctaagtttcaggttcct
ggttcagtccagcagaattgcagctcaggaggatttggaaagattgttaactttcctaac
ttttcattcccagggagaagcaatttaggatcttccaaggcacaactggggggaaaggga
tcaggaaatatggcacaaggaggagatgctaaagagggttcagtcatgacagttgggctg
agccactgcggcagcaatcaagttgtgaatgaggctgacttgagccgattttcaagcagt
ggcgttggcaccggttgtttatcttcagggcatgtcaaggaaaatgttatgaggatagtt
tctcagggggacagaaggcaaacagagacgcttgaacctactgttacttcatcttccggt
ggtgggtcgggcagtagttttgggagaacatacaagcagtcgaccgacaccaatagccac
aaaagaaagggcagagaagcagaggaatctgagtgccaaagcgaggctgctgaacatgaa
tcagctgcaagaaacaaggcatcacaaagatccgggtcaactaggaggagccgtgctgct
gaagtccataatctctcagagaggagacggagagatcgaatcaatgagaaaatgaaggca
ttacaggagcttatacctcacagcaacaagtcagataaagcatcgatgctagatgaggca
attgagtacttgaagtcccttcagttacaacttcagttgatgtggatgggaggtggtgtc
gcgcctatgatgtttccaggagtccagcactatatggccagaatgggaatgggaatgtgt
ccacctccactgccttctattcacaacccaatgcatttaccaagggttcaactagttgat
cagtccacatctgcagttccaccatcaaaccagcctccaatttgccaaaccccagtcttg
aatccggttaattatcaaaatcagatgccaaatcccaactttccggagcagtttgcgcat
tacatgggcttccaccctatgcaaactccctctcagcccatgaatgtgttcagctttgga
tcccagagtcaccccatggcatcgcctgccaccactggtggcacccccactgcagctgct
gcagttgatggtgctccaggcagcaagttgggttaa
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