KEGG   Vitis vinifera (wine grape): 100264259
Entry
100264259         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100264259
  KO
K12173  BRCA1-A complex subunit BRE
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100264259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100264259
   03036 Chromosome and associated proteins [BR:vvi03036]
    100264259
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100264259
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    100264259
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   BRISC complex
    100264259
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     100264259
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     100264259
SSDB
Motif
Pfam: BRE
Other DBs
NCBI-GeneID: 100264259
NCBI-ProteinID: XP_002275256
UniProt: E0CQ68
LinkDB
Position
18:complement(join(12289918..12289978,12290056..12290153,12291207..12291272,12292276..12292329,12293860..12293949,12294065..12294113,12294213..12294343,12294460..12294558,12294681..12294716,12295974..12296064,12296164..12296350,12296453..12296540,12296949..12297026))
AA seq 375 aa
MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIY
NAQCPLAAPDVIFGPEDENFHPFCVTGDEGDFKLSKNSLSDWNSKDPSGLLTLIHELRDL
YLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMSSGVEKPEEVKFSVPLLDMDINKMVF
GCNWRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCMA
EYLPNLEETLERQILDAVSLIDVRRHFIEALAPVFGRPLEADPVFCRKVTFLAASGVFTC
LVHFFLPTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERILEFLV
DECLNFKKFCNEAQL
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgactaccgatgcttttcctccggtcatagctgcgcagatcaattatttgctttctcat
tctcctctttccattaagattgatcagatgtgggctggttgcaagtactctggtttgctg
gatcgcttctctttgctcattcccttctgtttagatttcatcaaatgggatgtcatatat
aatgcgcagtgtccattggctgctccagatgtcatatttggacctgaagatgaaaatttt
catccattttgtgtgactggtgatgaaggggattttaagttgtcaaagaacagtttgtct
gattggaatagcaaggacccttcagggttactgactcttattcatgaactgagggatcta
tacttgtcctaccagaagaagcgcattggagaagttgatgatgatagactgaaatttgaa
attagcacaattgtatcaagggagggaatcgaaatgtacatgagttcgggtgttgaaaag
ccagaggaagtaaaattttcagtgcctcttttggacatggatataaataaaatggtattt
ggttgcaactggagacatcagcagaagatatacttacaggttatatttcctgttggaaga
aaatatgtgtctgccccttcagctccacgtttaaaattagtatcttctcctgaattgaag
gttctctttcctattgaagatgtcaagcttcctccatggttggatgggatgtgcatggct
gaatatcttcccaatttagaagaaacacttgagagacagatcttggatgcagtttcatta
attgatgttagaagacactttattgaggcattggcacccgtatttggaaggccattagaa
gctgatccggtgttttgcagaaaagttacatttcttgctgcatctggggtgtttacatgt
ctggtgcattttttccttccaacgcagttcccaaagcaacagccagttttgatgcttcaa
agttctcagcatttcaattcccaaggtgcaccaatcaaatcacatcttttgacagagtat
ccgtggagtcctagatgggaatcatcacaaatggctgagcgaatcttagagtttctggtg
gatgaatgtttgaacttcaaaaagttctgcaatgaggctcaactttag

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