Vicia villosa (hairy vetch): 131627418
Help
Entry
131627418 CDS
T09680
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
131627418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131627418
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
131627418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
131627418
NCBI-ProteinID:
XP_058754260
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MGVPAFYRWLADRYPLSITDVVEEEPTLTDDGVPLPIDASSPNPNGMEFDNLYLDMNGII
HPCFHPDGKPAPATYDEVFQLIFDYVDHLFLLVRPRKLLYLATDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFASEGTPLSPKDKPETSDSNVITPGTKFMAALSVALQSYVQ
TRLNLNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNVPGFNPNTRHCLYGLDADLIML
SLATHEIHFSILREVITLPGQQDKCFVCGQVGHYAADCHGKPETKTEDGSSADDKPVHKK
KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMHLYRKEFTAMGGYLTYAGKVFLDRVEYFIQSVAVHEDQIFHKRVRIQQVAENNEE
MRARARGVMPQEPRPSLSDKVKLGQPGYKDRYYVEKFGVSSLEEIDKIKKDVVLKYVEGL
CWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLLNIEIIFSPGEPFKPFDQLMGVLPASSS
NALPEKYRDLMTNPSSPIFHFYPADFEIDMNGKKFAWQGVAKLPFIDEKKLLAATRKLED
TLTMQEDEQLRNSVMLDLLYVNRAHDLASHILSYYKVYGQLPTHERCVSPIKANASGGMN
GYLWACERNVLNSIVLSPIDGLPDTESNQVLNITYLNPSRHGHIPKPPDGVVIPKKLVED
IDIKPFPMLWHEDNVGRGQQGRERPQLPGAITGFQLGEAAHRLVKNSLNIKLNNTSHVLA
EQPPVRHTVNRFQSAGPSGYGTYSRENTNSYYGEYNHHGVMTRHRNPVSSNGGHIDRQNF
RIQDRSRHQEQLQNVNNGFSSLTMEEGSRPTPSRQSISRPTTNFEPRYVQNTGPPTPHPK
WNTKAPINGIYTRHQETAYGAVPRDKPAKKVYQVKTRLPQETPDYGNQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagctttttaccggtggctcgccgaccgttacccactctcgatcaccgat
gtagtcgaagaagaaccaaccctcaccgacgacggtgttcctttgcctattgacgcgtct
tcaccaaatcccaacggaatggagttcgacaacttgtacttggacatgaacggcatcatt
cacccttgttttcaccctgatggcaagccagcaccagctacctatgatgaggtgtttcaa
ttgatatttgattatgttgaccatctctttttgttggttcgaccgaggaagcttctctac
cttgcaactgatggtgttgcaccacgagcaaaaatgaatcagcaacgttctcggcgcttc
cgggctgcaaaagatgcagccgaggctgaagcggaagaggaaaggctgaggaaagaattc
gccagtgagggaacacctttgtctcccaaagataagcccgagacttctgactcaaatgtc
attacccctggtactaaatttatggcagctctttcagtggctcttcagtcttatgtacag
actagattgaacctcaaccctgcctggaaaaatataaaggttatactttctgattcaaat
gttcctggtgagggagaacataaaataatggaatacatccggttacaacgtaatgttcct
ggtttcaatccgaatactcgccattgtttgtatggattggatgctgatttgattatgctc
tcgttagctactcatgagattcacttctcaatattgagggaggtaattactttacctgga
caacaagacaagtgttttgtgtgtggccaagttggccattatgcagctgattgtcacggt
aagccagaaactaaaactgaggatgggagttctgctgatgataaaccagttcacaagaag
aaatatcagtttctaaacatctgggtgcttcgtgaatatttgcaatatgaattggagatt
cccaaccctccttttgagattgactttgaaagagtagtggatgattttgtatttctatgc
ttctttgtcggaaatgactttcttcctcatatgccaacattagagatcagggagggagct
ataaatttactgatgcatctatatagaaaggagtttactgccatgggtggctatcttact
tatgcgggcaaggttttcttagatagagtggaatactttatccaatctgtcgctgttcat
gaagatcaaatctttcacaaacgagttcgaattcagcaggtggcagaaaataatgaagag
atgagagctagggcaagaggagtaatgcctcaagagccacggccctcactttccgataag
gtcaagttagggcagcctggatacaaggataggtattatgttgaaaagtttggtgtatca
agtttggaggagatagataaaattaagaaagatgtagttttgaaatatgtggaaggcctt
tgttgggtttgccagtattattataatggcgtatgctcgtggaaatggtactacccgtat
cattatgctccttttgcttctgatcttaaagatctccttaatatagaaataattttttca
ccgggagagccattcaaaccatttgatcagcttatgggggtcctacctgcttcaagttca
aatgcactgcctgaaaaatatagggatttgatgaccaatccttcatcaccaattttccac
ttctacccagctgatttcgagattgatatgaatggaaaaaaattcgcatggcagggtgtt
gccaaattgccatttattgacgagaagaaattacttgcagccacaaggaagcttgaagac
acgttaacgatgcaggaggatgaacaacttcggaatagtgtgatgcttgatttgctttat
gtcaaccgtgcacatgatttggcttcacatattttatcgtattacaaagtttatggccaa
ttacctactcatgaaagatgtgtttcaccaattaaagcaaatgctagtggtgggatgaat
ggatatctttgggcgtgtgagagaaatgttttaaactctattgttttgtctccaattgat
ggattaccagataccgagagtaatcaagttttaaatattacatatcttaatccttctaga
catggacacatcccaaaaccaccagatggtgtagtgatacccaaaaagttagtagaagac
attgatatcaaaccttttcctatgctatggcatgaagacaatgttggccggggacagcaa
ggcagggaaaggccacaattacctggagcaataactggatttcaattaggagaagcagct
catcgcctggtcaagaactcccttaacattaaattgaataatacatcccatgtactggca
gagcaacctccagttcgccatacagtgaacaggttccaatcagctggaccatctggatat
ggaacatattctcgcgagaacaccaacagttattatggagaatataatcaccatggcgta
atgactagacatagaaatccagtctcatctaatggtgggcacatagacaggcagaatttt
agaatacaagataggtcacggcatcaagaacagctccaaaatgtgaacaatgggttttct
tctctaacaatggaggaaggatcgagacctacaccatcgaggcagtcaatttctcgtcca
acaaccaattttgaaccccgatatgtgcaaaacacaggtcctccaacaccacatccaaag
tggaatactaaagcacctataaatggaatatatactaggcatcaagaaactgcatatggg
gcagtacctcgcgataagccggcgaagaaggtttaccaagttaaaacacggttgccccaa
gaaactccagactatgggaatcagtag
DBGET
integrated database retrieval system
