Vicia villosa (hairy vetch): 131644031
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Entry
131644031 CDS
T09680
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131644031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131644031
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131644031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA
AAA_23
AAA_29
Arf
ORC-CDC6-like
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-GeneID:
131644031
NCBI-ProteinID:
XP_058770399
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All DBs
Position
LG1:complement(121101313..121104179)
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AA seq
333 aa
AA seq
DB search
MGITVNSDSKPTTVEIKELKFTYPGIDGHPPPGSKPLIQDFSLNLFSGDRCLLVGSNGAG
KTTILKILGGKHMVEPDMVRVLGRSAFHDTALESSGDLCYLGGEWRRDVAFAGFEVPIQM
DISAEKMIFGVAGIDPQRRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLL
DEITVDLDVLARADLLKFLKKECDERGATIIYATHIFDGLDDWPTNIVYVAHGRLQLAMP
IEKVKEISKLSLMRTIEAWLRKERDEDRRKRKENKAAGLPEFEKQIDGSRVVGGDPARAS
VRVTNNGWAAGRLHSTIAGEENFVLSSNRVLRG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaccgtcaattcagattcaaagccaacaacagttgagatcaaagagctgaaa
ttcacttatcctggaatcgacggccatcctccgccgggttccaaacctctcatacaagac
ttctctctcaacctcttctccggtgatcggtgccttctcgtcggatccaatggtgccgga
aagactacgattctgaagatattgggagggaaacacatggtggagccggacatggttcgt
gttcttggaagatcggcttttcatgatacagctttggaatcttcgggtgatttgtgttat
cttggtggtgagtggagaagagatgttgcttttgctggttttgaagttccaatacagatg
gatatttctgctgagaaaatgatatttggtgtggctggcattgatcctcaaagaagagca
gagctaatcaaggtattagatatcaatctttcatggagattgcacaaagtatctgatggt
cagagaagaagagtgcaaatttgtatgggcctcctcaaaccatttaaggttcttctgctg
gatgagataacggtcgaccttgatgttctagccagagctgaccttctgaagtttctaaaa
aaggaatgtgatgagaggggtgccacaattatatatgcaacacatatatttgacggtctt
gacgattggccaacaaatattgtttatgtagctcatggaaggctgcaattagcaatgcct
atagagaaagtcaaagagattagcaaattgtcactaatgagaacgatagaagcttggcta
cgaaaagaacgagatgaagatagaagaaaaaggaaagaaaacaaggcggctggccttcct
gaatttgaaaagcaaattgatggaagccgtgtggttgggggggatcctgcacgtgcttca
gttcgagttactaataatggctgggccgcaggccggttacattccaccattgctggtgaa
gaaaacttcgtcctaagctcaaaccgagtattgagggggtaa
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