Vicia villosa (hairy vetch): 131644131
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Entry
131644131 CDS
T09680
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
131644131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131644131
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
131644131
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
131644131
NCBI-ProteinID:
XP_058770528
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Position
LG1:126179048..126188968
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AA seq
948 aa
AA seq
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MGVPAFYRWLADRYPLSITDVVEEEPTVTDDGVPLPIDASTPNPNGMEFDNLYLDMNGII
HPCFHPDGKPAPATYDEVFQLIFDYVDHLFLLVRPRKLLYLATDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFAGEGTPLSPKDKPETSDSNVITPGTKFMAALSVALQSYVQ
TRLKLNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNVPGFNPNTRHCLYGLDADLIML
SLATHEIHFSILREVITLPGQQDKCFVCGQVGHYAADCHGKPETKTEDGSSADDKPVHKK
KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMHLYRKEFTAMGGYLTYAGKVFLDRVEYFIQSVAVHEDQIFQKRVRIQQVAENNEE
MRARARGVMPQEPRPSLSDKVKLGQPGYKERYYVEKFGVSSLEEIDKIKKDVVLKYVEGL
CWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLLNMEIIFSPGEPFKPFDQLMGVLPASSS
NALPEKYRDLMTNPSSPIFHFYPADFEIDMNGKKFAWQGVAKLPFIDEKKLLAATRKLED
TLTMQEDEQLRNSVMLDLLYVNRAHDLASHILSYYKVYGQLPTHERCVSPIKANASGGMN
GYLWACERNVLNSIVLSPIDGLPDTESNQVLNITYLNPSRHGHIPKPPDGVVIPKKLVED
IDIKPFPMLWHEDNVGRGQQGRERPQLPGAITGFQLGEAAHRLVKNSLNIKLNNTSHVLA
EQPPVRHTVNRFQSAGPSGYGTYSRENTNSYYGEYNHHGVMTRHRNPVSSNGGHIDKQNF
RIQDRSRHQEQLQNVNNGFSSLTMKEGSRPTPSRQSISRPTTNFEPRYVQNTGPPTPHPK
WNTKAPINGIYTRHQETAYGAVTRDKPAKKVYQVKTRLPQETPDCGNQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagctttttaccggtggctcgccgaccgttacccactctcgatcaccgat
gtagtcgaagaagaaccaaccgtcaccgacgacggcgttcctttgcctattgacgcgtct
acaccaaatcccaacggaatggagttcgataacttgtacttggacatgaacggcatcatt
catccttgttttcaccctgatggcaagccagcaccagctacatatgatgaggtgtttcaa
ttgatatttgattatgttgaccatctctttttgttggttcgaccgaggaagcttctctac
cttgcaactgatggtgttgcaccacgagcaaaaatgaatcagcaacgttctcggcgcttc
cgggctgcaaaagatgcagccgaggctgaagcggaagaggaaaggctgaggaaagaattc
gccggtgagggaacacctttgtctcccaaagataagcccgagacttctgactcaaatgtc
attacccctggtactaaatttatggcagctctttcagtggctcttcagtcttatgtacag
actagattgaaactcaaccctgcctggaaaaatataaaggttatactttctgattcaaat
gttcctggtgagggagaacataaaataatggaatacatccggttacaacgtaatgttcct
ggtttcaatccgaatactcgccattgtttgtatggattggatgctgatttgattatgctc
tcattagctactcatgagattcacttctcaatattgagggaggtaattactttacctgga
caacaagacaagtgttttgtgtgtggccaagttggccattatgcagctgattgtcacggt
aagccagaaactaaaactgaggacgggagttctgctgatgataaaccagttcacaagaag
aaatatcagtttcttaacatctgggtgcttcgtgaatatttgcaatatgaattggagatt
cccaaccctccttttgagattgactttgaaagagtagtggatgattttgtatttctatgc
ttctttgtcggaaatgactttcttcctcatatgccaacattagagatcagggagggagct
ataaatttactgatgcatctatatagaaaggagtttactgccatgggtggctatcttact
tatgcgggcaaggttttcttagatagagtggaatactttatccaatctgtcgctgttcat
gaagatcaaatctttcagaaacgagttcgaattcagcaggtggcagaaaataatgaagag
atgagagctagggcaagaggagtaatgcctcaagagccacggccctcactttccgataag
gtcaagttagggcagcctggatacaaggaaaggtattatgttgaaaagtttggtgtatca
agtttggaggagatagataaaattaagaaagatgtagttttgaaatatgtggaaggcctt
tgttgggtttgccagtattattataatggcgtatgctcgtggaaatggtactacccgtat
cattatgctccttttgcttctgatcttaaagatctccttaatatggaaataattttttca
ccgggagagccattcaaaccatttgatcagcttatgggggtcctacctgcttcaagttca
aatgcactgcctgaaaaatatagggatttgatgaccaatccttcatcaccaattttccac
ttctacccagctgatttcgagattgatatgaatggaaaaaaattcgcatggcagggtgtt
gccaaattgccatttattgacgagaagaaattacttgcggccacaaggaagcttgaagac
acgttaacgatgcaggaggatgaacaacttcggaatagtgtgatgcttgatttgctttat
gtcaaccgtgcacatgatttggcttcacatattttatcgtattacaaagtttatggccaa
ttacctactcatgaaagatgtgtttcaccgattaaagcaaatgctagtggtgggatgaat
ggatatctttgggcgtgtgagagaaatgttttaaactctattgttttgtctccaattgat
ggattgccagataccgagagtaatcaagttttaaatattacatatcttaatccttctaga
catggacacatcccaaaaccaccagatggtgtagtgatacccaaaaagttagtagaagac
attgatatcaaaccttttcctatgctatggcatgaagacaatgttggccggggacagcaa
ggcagggaaaggccacaattacctggagcaataactggatttcaattaggagaagcagct
catcgccttgtcaagaactcccttaacattaaattgaataatacatcccatgtactggca
gagcaacctccagttcgccatacagtgaacaggttccaatcagctggaccatctggatat
ggaacatattctcgcgagaacaccaacagttattatggagaatataatcaccatggcgta
atgactagacatagaaatccagtctcatctaatggtgggcacatagacaagcagaatttt
agaatacaagataggtcacggcatcaagaacagctccaaaatgtgaacaatgggttttct
tctctaacaatgaaggaaggatcgagacctacaccatcgaggcagtcaatttctcgtcca
acaaccaattttgaaccccgatatgtgcaaaacacaggtcctccaacaccacatccaaag
tggaatactaaagcacctataaatggaatatatactaggcatcaagaaactgcatatggg
gcagtaactcgcgataagccggcgaagaaggtttaccaagttaaaacacggttgccccaa
gaaactccagactgtgggaatcagtag
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