KEGG   Vicia villosa (hairy vetch): 131652425
Entry
131652425         CDS       T09680                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131652425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvo03021]
    131652425
Enzymes [BR:vvo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     131652425
Transcription machinery [BR:vvo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     131652425
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 131652425
NCBI-ProteinID: XP_058778257
LinkDB
Position
LG2:complement(149379730..149395873)
AA seq 1539 aa
MRSARLPDSMDEEDLATEHKVPSGLIKAIKFDVLSGEDIEKISSLEINAPGQVTCSDLGL
PNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILKKICPACKSIRHELRI
KRHKSLLGINNQPKGCKYCSGNGMGRYPAMKFRVSSNDFFRRTAIIVEVNDASLNKKRNL
GRGLPADYWDFILGDAQPEENHVNRRVLSPVQVEQLLSGVDSNFIEKYIPSMDLVGLSCF
LVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPD
RTPINVFTELQQRKVGENACNSSGLRWMKDVVLGKRNDSTFRTVVVGDPDLEISEIGIPC
QIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGHINVRRKGKPVVLYKKEDLQIGDVIYRP
LVDGDIVLINRPPSIHQHSMIALTVRVLPIPSVVSINPICCSPLKGDFDGDCLHGYIPQS
VAARVELNELVALDKQLINGQSGTNLLSLSQDSLTAAYLLLQDGVLLNVYQIQQLQMLCN
RKLTPPAIVKAPSSNTSFWSGKQLVSMLLPSNFDYAFPSNDVFVSDGELISCSEASGWLR
DSENNVFQSLVENFQGETLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDTYARKNMMEE
ISYGLREAEQACDFNQLLVNHFCDFLSGSLADSENDMTVDVDRLNYERQISAALSQASVD
AFKQVFRNIQSLADKHACKENTFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPR
ELTCAGWNSHKGLHSTEMFSEPGQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDN
ADLPGTLTRRLMFFMRDMYDAYDGSVRNLYGNQLIQFSYDAEEDLSCDSNFREDIIGGEP
VGALSACAFSEAAYSALSQPISLLEASPLLNLKNVLECGSRKRSGDQTVSLFLSEKIGKQ
RNGFEYAALEVKNYLERLMFSNVVSTVMIIFTPQSCNLEKHSPWVCHFHLDKENLTRRNL
EVHSIIDSLYQRYDSFRKDSKFTLPNMKISSKKYCIDCMAKEGGETSVYKKKDSEDCITV
TLVEDSKNAEQLDAIRNVLIPLLLQTAIKGFLEIKKVDILWKDLPKVSKSYGSSGELYLK
VTMATDNDSGAFWGSLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQQYLHNLSSA
TSDTGKSILPKHLRLVANSLSSCGEFVGLNAKGMARQRKHAAVSSPFVQACFSNPGTSFL
KAAKSGVVDDLQGSLDALAWGNCLPMGTGGQFDIIYSEKVQEIDKPVDVYGLLETSFSKL
EQETVIPQSHKYSSRNCNSEFRHKNGGYAPKESKWKGAIRNNITANDIQKLTTASRFILN
KYLVDEILGERDKSTIMRVLHFHPRKNEKLGSGLQDIKVGWHPKFTDSRCFFIIRTDGTV
EDFSYRKCVIAALDIIDPEKSKIQKKKWSENDDIGTKKWSRNDDKEAKKRSENYDNGVRK
WSESYDLKTKKWWRSDDLEDKKWSRNYDIEAKKLKTVEG
NT seq 4620 nt   +upstreamnt  +downstreamnt
atgcggagtgcaaggttaccagattcgatggatgaagaagaccttgcaacagagcacaaa
gtgccatctggtctcataaaagcgataaagtttgatgttttaagcggggaagatatagag
aagatctcttctttggagataaatgcgcccgggcaggtcacttgttctgatttgggactt
ccaaattcgtcttatgggtgcacgacatgtggttcaaaagatagaaagtcctgtgaaggt
cattttggagcaatcaaatttccttttaccatattacatccatacttcatggcagagatt
gcagaaatcttgaaaaaaatttgccctgcatgtaaatctattcgacatgaattacggatc
aagcgtcataaatcactccttggaatcaataatcagcccaaaggttgcaaatattgttct
ggaaatggtatgggccgttatcccgccatgaaattcagagtttcatccaatgatttcttc
aggagaactgcaattattgtggaagtaaatgatgcatctttaaacaagaaaagaaatttg
gggcgaggactgcctgctgattattgggattttattcttggagatgctcaaccagaagaa
aatcatgtaaataggagggttttatcacccgttcaggttgagcaattattaagtggtgtt
gattcaaacttcattgaaaagtatataccaagcatggatttggttggtctcagttgcttc
ctggtggcaccaaattgtcatcgtgtcacggaagtccctcatcgactttctgggggatat
ccattgagttttgataacaggaccagagcttgcaagaaattggttgatttcaggggtaca
gcaaatgagttaagttctcgtgttttggattgcttgcggttttccaagataaatcctgat
agaacaccaattaatgtttttactgagttgcaacaaagaaaggttggagaaaatgcttgc
aattcttctggcttaagatggatgaaagatgtagttcttggaaaacgcaatgacagtaca
ttccgaactgtggttgttggtgatccagacctcgagataagtgaaattggtataccctgt
caaattgcagaaggtttgcaggtttctgagtacgtaaataggcagaataagcaaaatttg
ctttactgttgtgagctgcgtttactagagaaggggcatataaatgttcgcagaaagggt
aaaccagtggttctgtataaaaaagaagatttgcagataggagacgtaatttaccggcct
cttgttgatggggatatagtgttgataaatagacctccttccatacatcaacattctatg
attgctctcacggttagggttcttccaataccttctgtagtatctattaacccaatctgt
tgctcacctctgaagggggattttgatggtgattgccttcacgggtatattccacaatct
gttgctgctagagtggagcttaacgagttggttgctttggataagcaattgattaatggg
cagagtggtacaaatctgctttcgctttctcaggatagtttaactgctgcatatttgctg
ttgcaagatggggtccttttgaatgtttaccaaatccagcaacttcaaatgctttgcaat
agaaaattaacaccccctgcaattgtaaaggctccttcaagtaatacctcattttggagt
ggcaagcaattggtcagcatgctcttgccttctaattttgactacgcttttccttcaaat
gatgtttttgttagtgatggggagctgatatcttgttcggaggcttctgggtggttacgc
gattcagagaacaatgttttccaaagtcttgtggaaaattttcaaggggagactctggat
attttgcatggtgcacagaaagctctttgtgagtggttgtctatgactgggtttagtgtt
tccctttcagatttgtacctttcttctgatacctatgcgcgtaaaaacatgatggaggaa
atctcatatggattacgagaagccgaacaggcttgtgatttcaaccagttattggtaaat
catttttgtgattttctttcaggaagtctagcagatagtgaaaatgatatgactgttgac
gtggatcgtctgaattatgaaagacaaatatctgctgctctaagtcaagcgtcagttgat
gcttttaaacaggtttttcgcaatattcaaagtttagctgataaacacgcgtgcaaggaa
aatactttccttgctatgtttaaggctggaagtaagggtaatttactgaaattagtgcaa
cattccatgtgccttggacttcaacattccctggttcgcttgtcatacagaattccacgg
gaactcacatgtgctggttggaacagtcataaggggcttcattcaacagaaatgttttct
gaaccaggccaatcttacattgctcatgctgtggttgaaagctcttttcttactgggttg
aacccacttgaatgttttgttcattcagtgacgaatcgtgacagctctttcagtgacaat
gcagaccttcctgggacattgacccgtagacttatgttcttcatgcgtgatatgtacgat
gcatatgatggatctgtgagaaacttatatgggaatcaacttattcagttttcttatgat
gctgaagaggatttgtcttgtgatagcaattttcgagaggatattataggcggtgaacca
gtcggagcgctttctgcttgtgcgttttctgaggctgcttacagtgctttgagtcagcct
attagtctacttgaagcatcacctttgctgaatttaaaaaatgttctggagtgtggttca
aggaaaagaagtggtgatcagacagtgtctttatttttgtctgagaaaattggtaaacag
agaaatgggtttgagtatgcagcactggaagttaagaattatttggaaagattaatgttc
tcaaacgttgtttctactgtcatgataatattcactccacagtcttgcaatttagaaaaa
cacagtccttgggtttgccattttcatttagacaaggaaaatttaacaagaagaaattta
gaagtgcattctatcattgactccctttaccagagatatgactccttcagaaaagattca
aaattcactcttcccaatatgaaaatatcaagcaagaaatattgtatagattgcatggct
aaggaaggtggagaaacctctgtttataaaaaaaaagacagtgaagattgcatcaccgtc
acacttgtcgaagactctaagaatgctgaacagctggatgctattcgaaatgttctgatt
cctttacttttgcaaacagctataaaaggatttttggagatcaagaaggttgacattctc
tggaaggatcttccaaaagtatcgaaatcttatggttcttctggtgaactatacttgaag
gttaccatggccactgacaatgacagtggtgcattctggggttcactgataaaccattgt
cacagaataatgccgttaattgactggacacgaagtcatcctgataacattcatcatttc
tgctcagcctttggaatcgatgcaggatggcagcaatatctccataatttgtcgtctgca
acatctgacactggcaagtcaatccttcctaagcatctgcgccttgttgccaatagtctt
tcatcttgtggagagtttgtgggattaaatgctaaaggcatggcgcggcaaagaaaacat
gcagctgtttcatcacccttcgtgcaagcatgcttttcaaatcccggcacttccttttta
aaagctgcaaagtctggagtcgtagatgatctccagggcagcctggatgcattggcttgg
ggaaattgtctccccatggggacaggtgggcagtttgatattatatactcagagaaggta
caagaaattgataagcctgtagatgtatatggtctgctagaaaccagttttagcaagctt
gaacaagagactgttatccctcaatctcacaaatattcgtccagaaattgcaattcagag
tttaggcataaaaatggtggttacgctccaaaagagtctaagtggaagggtgctataaga
aataacattactgcaaatgatattcagaagcttactactgcatcaaggttcatactgaac
aagtatctggttgatgagatactaggtgagagagacaagtcaacaataatgagggttttg
cattttcatcctcgtaaaaatgagaagcttggctccggactacaagacataaaggttgga
tggcatcccaagtttacagatagccgatgtttttttataatacgaacggatgggactgtt
gaagatttttcataccgcaaatgcgttattgctgctcttgatattattgatccagaaaag
tcaaagatccaaaagaaaaaatggtcagaaaatgatgacataggaacaaaaaaatggtca
cgaaatgatgacaaggaagctaaaaaaagatctgaaaactatgacaatggagtaaggaaa
tggtcagaaagttatgacctaaaaactaaaaaatggtggagaagtgatgacttggaagat
aaaaaatggtcgagaaattatgacatcgaagctaaaaagttaaaaacagttgaaggataa

DBGET integrated database retrieval system