Vulpes vulpes (red fox): 112910635
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Entry
112910635 CDS
T05911
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112910635 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvp03041
]
112910635 (EFTUD2)
Spliceosome [BR:
vvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112910635 (EFTUD2)
Complex C
U5 SnRNP specific factors
112910635 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
112910635
NCBI-ProteinID:
XP_025842622
UniProt:
A0A3Q7RAR6
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatctcgatgagatggacgatgacgat
gatgacgatgatgtaggagatcatgatgaggaccaccctgggatggaggtggtgctgcat
gaggacaagaagtactaccccacagctgaggaggtgtatggccccgaggtagagaccatt
gttcaggaggaagacacccagcctctcaccgaacctattattaagccagtgaaaaccaag
aaattcaccctgatggagcagacattacctgtcacggtgtatgaaatggacttcttggca
gatctgatggataattcggagctcatcagaaatgtaaccctctgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctatgttacactgacatcctcttcacagagcaggagagaggtgtgggc
atcaaaagcactcctgtgacagtggtcttgccagataccaaaggaaaatcttacctcttc
aatatcatggacactccgggtcacgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagttgtccttttcattgatgctgctgagggcgtaatgctgaacactgag
cggctgatcaagcacgcagtgcaggagaggctggcggtcactgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcctccaactgatgcttattacaagctgcgtcac
atcgtagatgaggtcaatggattaataagcatgtattccactgatgagaatctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtatagcatctgcttcacgttg
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatttacttcaaccccaaaacacgaaagttcacaaaaaaggcc
ccaaccagcagctcccagaggagcttcgtggagtttattttggagcccctttataagatc
ctcgctcaggttgtgggtgatgtggacaccagcctccccaggactctggacgagcttggc
attcacctgaccaaggaggagctgaagctaaacatccgccccctgctcaggctggtctgc
aaaaaattctttggagagttcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagattgagcatacctacactggtggtgtagattccgat
ctcggcgaggccatgagcgactgtgaccctgacggtcctctgatgtgccacactaccaag
atgtacagcacagatgatggagtccagtttcatgcctttggcagggtgctgagtggcacc
atccacgctgggcagcccgtgaaggtcctgggggagaactacaccctggaagatgaggag
gactcccagatatgcactgtgggccgtctttggatctccgtagccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgta
aagacagcaactataactgaaccccggggcaatgaggaggctcagattttccggcccttg
aaattcaacaccacatctgttatcaagattgctgtggaaccagtcaatccctcagagctg
cccaagatgctggatggtctgcgcaaggtcaacaagagctatccatccctcaccacaaag
gtggaagagtctggggagcacgtgattctgggtactggggaactctacctagactgtgta
atgcacgatttgcggaagatgtactcagagatcgacatcaaggtggctgaccctgttgtc
acattttgtgagacggtggtggaaacatcttccctcaagtgctttgctgaaacgcccaat
aaaaaaaacaagattaccatgattgcagagcctcttgagaagggccttgccgaggacata
gagaatgaggtggtccagatcacgtggaacaggaagaaattgggagaattcttccagacc
aagtacgattgggatctgctggctgcacgttccatctgggctttcggccctgatgccact
ggccccaacatcttggtagatgataccctgccctctgaggtggacaaggctcttctcggc
tcagtgaaggacagcattgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagccc
ctgcaccggggtgggggccaaatcatccccacagcaaggagagtcgtctattctgccttc
ctcatggccactcctcgtctgatggagccatactactttgtagaggtccaagcccctgca
gattgtgtctctgctgtgtacaccgtcctggccaggcgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacacaatcaaagctttcatccccgccattgactct
tttggctttgagactgatctacggactcacacccaagggcaggccttttcgttatctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcattcgcccc
ctggagccacagcctgctcctcacctggcccgggaattcatgatcaaaacccgtcgcagg
aagggcctgagtgaggatgtaagcatcagcaagttcttcgatgatcccatgttgctggag
ctcgccaagcaggatgttgtactcaattaccccatgtga
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