Vibrio vulnificus CMCP6: VV1_3099
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Entry
VV1_3099 CDS
T00108
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VV1_3099 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_3099 (nth)
Enzymes [BR:
vvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VV1_3099 (nth)
DNA repair and recombination proteins [BR:
vvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VV1_3099 (nth)
Prokaryotic type
VV1_3099 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AAO11422
UniProt:
A0A3Q0L719
LinkDB
All DBs
Position
I:3168606..3169247
Genome browser
AA seq
213 aa
AA seq
DB search
MNKDKRIQILERLRENNPNPQTELNWNSPFELLIAVLLSAQATDVSVNKATDKLFPVANT
PQAMLDLGVEGLKEYIKTIGLFNSKAENTIKTCRILLEKHNGEVPEDRDALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAPGKNVDEVEQKLLKVVPKEFKLDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPEN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagacaaacgcatacaaattctcgaacgattacgagaaaacaaccccaaccca
caaaccgaactcaattggaactccccttttgagctgctgatagcggttttgttatcagca
caagcaacggacgtcagtgtcaataaagccaccgacaaactgttcccagtcgccaacacc
cctcaagcgatgttggatcttggggtggaaggtctgaaagagtacattaagaccattggc
ctgtttaattccaaagcggaaaacaccatcaaaacgtgtcgcattctgctcgaaaaacac
aacggtgaagtccctgaagaccgagacgctcttgaagcactgcccggggttgggcgcaaa
accgccaatgtggtgctcaacaccgcctttggctggccaaccatcgctgtcgatacccat
atttaccgcgtttccaatcgcacaaagtttgccccaggcaaaaacgtggatgaagtcgag
cagaagttacttaaagtggtaccaaaagagtttaaactcgatgtccaccactggttgatt
ttgcatggacgctacacctgtattgcacgcaagcctcgctgtggcagttgcatcattgaa
gacctgtgcgaatttaaagaaaaagtctacccagagaattaa
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