KEGG   Wielerella bovis: MIS45_01015
Entry
MIS45_01015       CDS       T08126                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
wbo  Wielerella bovis
Pathway
wbo03030  DNA replication
wbo03410  Base excision repair
wbo03420  Nucleotide excision repair
wbo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wbo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MIS45_01015
   03410 Base excision repair
    MIS45_01015
   03420 Nucleotide excision repair
    MIS45_01015
   03430 Mismatch repair
    MIS45_01015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wbo03032]
    MIS45_01015
   03400 DNA repair and recombination proteins [BR:wbo03400]
    MIS45_01015
Enzymes [BR:wbo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MIS45_01015
DNA replication proteins [BR:wbo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MIS45_01015
DNA repair and recombination proteins [BR:wbo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MIS45_01015
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MIS45_01015
   MMR (mismatch excision repair)
    DNA ligase
     MIS45_01015
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MIS45_01015
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2 Nlig-Ia DUF4796_N IL34 RUBY_RBDX
Other DBs
NCBI-ProteinID: ULJ69481
LinkDB
Position
193664..196276
AA seq 870 aa
MQNKIKQLTELLNRYAHEYYTLDAPTVPDSEYDQLYRELERLESEFPQFRLPESPTQRVG
GAVLSEFASVAHAVPMLSLNNAFSPQDENGSFDHAETWAFDERVCKDLGVATTVYTIEPK
FDGLAISLLYQNGVLVQAATRGDGTTGEDVTENVKTIRNIPLKLHGNRIPEMMEVRGEVL
MLKADFSALNEKQIALQQKPFANPRNAAAGSLRQLNSRIAAERKLHFFGYGIARFDGMPP
ENAPQTHAEELLWLAELGFSLPQSQSCQQSVPSPACGGGLGWGQNGVTPQNSFENQQATP
TPTLPRQTGGGADWRQPESYDWKICANIAEVLQFYEQMSAKRPDLPYEIDGMVIKVNDLA
QQVKLGFVSRAPRWAIAHKFPAEEALTQVEAIDVQVGRTGAITPVARLKPVSVGGVVVTN
ATLHNQDEVARKDVRVGDTVIVRRAGDVIPEVVRVILEHRPKIITHTIGNKSEFGQASIM
HTPPTQTIFTLGIQGELFGEANIKQEQEIDEFPAFRLPEKCPVCASPIVREENEAVARCT
GGMLCQAQRSQGLIHFASRKAMDIVGLGDKQIEALVEQNILTNFADIYQLDIPKLQKIKD
PKSSASKWAENILQGVENSRKPLLSRFLFALGIRHVGESTAKQLAAAFGDVATVRRAPEP
VLACLPDIGGVVAQSIAAYFRQPENNQQLDLLLDFVTPQTAMINTNVRELATPARWISRL
PNIKISEKRAQELWDLAGASMDGLLNDKVLPSEWQNWRNIDENRTLLLQIDEFLSQMPDL
STQQNASEVSGSLNAQIVGKTFVLTGTLPTLKRDEAAALIEAAGGKVSGSVSKKTDFVVA
GAEAGSKLEKAQSLGVAILSEEELLSLLGN
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgcaaaacaaaatcaagcaattaaccgagctactcaaccgctacgcccacgaatattac
actttggacgcgcccaccgtccccgacagcgaatacgaccaactctaccgcgaattggaa
cgcctagaaagcgagtttccgcaattcaggctgcctgaaagccccacgcagcgcgtaggc
ggcgcggttttgagcgaatttgccagcgttgcccatgccgtgccgatgttgtcgctgaac
aacgccttttcgccacaagacgaaaacggctcatttgaccacgccgaaacatgggcgttt
gacgagcgcgtttgcaaagatttgggcgtggcaacaacggtttacaccattgagccaaaa
tttgacggcttggcaatcagcttgctgtatcaaaatggcgtactggttcaggcagccacg
cgcggcgacggcacgactggcgaagacgttaccgaaaatgtcaaaaccatacgaaatatc
ccattgaaattacacggcaatcgcattcccgaaatgatggaagtgcgcggcgaagtcctg
atgttgaaagccgatttcagcgccctaaacgaaaaacaaatcgcgctgcaacaaaaacct
ttcgccaacccacgcaacgccgccgcaggcagcctgcgccaactcaattcgcgcattgcg
gcagagcgcaaattgcattttttcggctacggcattgcgcgatttgacggcatgccgccc
gaaaatgcgccccaaacccatgcggaagaattgttgtggttggcggaactcggtttcagc
ctaccgcaatctcaatcgtgccaacaatctgtcccctcccctgcttgcgggggagggcta
gggtgggggcaaaacggtgtcacgccacaaaattcatttgaaaatcaacaagccaccccc
accccaaccctcccccgccagacgggggggggggcagattggaggcagcctgaaagttac
gactggaaaatctgcgccaatatcgccgaagttctccaattttacgagcaaatgtccgcc
aaacgccccgatttaccctacgaaattgacggtatggtcatcaaagtgaacgatttggcg
caacaggtaaaattgggctttgtttcacgcgcaccgcgttgggcaatcgcgcacaaattc
cctgcggaagaagccttgacacaagttgaagcgattgacgtgcaagtcgggcgcacgggc
gcaatcacgcctgtggcgcggctcaaacccgtgtcggtgggtggcgtggtggttaccaac
gcgactttgcacaatcaagacgaagtggcacgcaaagacgtgcgcgtgggcgacaccgtc
atcgtgcgtcgcgctggcgatgtgattcccgaagtggtgcgcgtgattttggaacaccgc
ccaaaaattattacacatacaataggaaataaatcagaatttgggcaagcatcaataatg
catacaccgcctacacaaacaatttttacacttggtatccaaggggagttatttggagaa
gctaatattaaacaagaacaagaaatagatgaatttccagcattcaggctgcctgaaaaa
tgccccgtttgcgccagcccgattgtgcgcgaagaaaacgaagctgtggcgcgttgcaca
ggcggcatgctctgccaagcgcaacgcagtcaaggacttatccacttcgccagccgcaaa
gcgatggacatagtcggcttgggcgacaagcaaattgaagcattggtagaacaaaatatt
ttgacgaattttgccgatatttatcaactggatattcccaaattacaaaaaatcaaagac
cccaaatccagcgcaagcaaatgggcagaaaacattttgcaaggcgtggaaaacagccgt
aaacctttgttatcgcgatttttatttgcgctgggcatacgccacgttggcgaaagcacc
gccaaacaactcgctgccgcttttggcgatgtggcgaccgtgcgccgtgcgcccgagcct
gtgttggcgtgtttgcccgatattgggggcgtggtggcgcagtccattgccgcgtatttc
aggcaacctgaaaacaatcaacagcttgatttattgttggatttcgttacacctcaaacc
gcaatgattaacacgaatgtgcgtgaattggcaacaccagcgcgctggatttcccgtttg
cccaacatcaaaatcagcgaaaaacgggcgcaagaattgtgggatttggctggtgcaagt
atggacggtttgttgaacgacaaagtgttgccaagcgaatggcaaaattggcgcaatatt
gatgaaaatcgcacattattgttgcaaattgatgaatttttatcgcaaatgcccgattta
tccacacaacaaaacgcgagcgaagtttcaggcagcctgaacgcgcaaattgttggcaaa
acctttgttttaacaggcactttgcccacgctgaaacgcgatgaagcggcagctttgatt
gaagcggctggcggcaaagtttcaggcagcgtgtccaagaaaacggattttgtggtggca
ggcgcggaagcgggcagcaaattggaaaaagcgcagagtttgggcgtggcgattttgtcg
gaagaagagttgttgagtttgttggggaattaa

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