Wolbachia endosymbiont of Drosophila mauritiana: EJB00_03065
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Entry
EJB00_03065 CDS
T07604
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wdm
Wolbachia endosymbiont of Drosophila mauritiana
Pathway
wdm03030
DNA replication
wdm03410
Base excision repair
wdm03420
Nucleotide excision repair
wdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJB00_03065 (ligA)
03410 Base excision repair
EJB00_03065 (ligA)
03420 Nucleotide excision repair
EJB00_03065 (ligA)
03430 Mismatch repair
EJB00_03065 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wdm03032
]
EJB00_03065 (ligA)
03400 DNA repair and recombination proteins [BR:
wdm03400
]
EJB00_03065 (ligA)
Enzymes [BR:
wdm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EJB00_03065 (ligA)
DNA replication proteins [BR:
wdm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EJB00_03065 (ligA)
DNA repair and recombination proteins [BR:
wdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EJB00_03065 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJB00_03065 (ligA)
MMR (mismatch excision repair)
DNA ligase
EJB00_03065 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EJB00_03065 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
Motif
Other DBs
NCBI-ProteinID:
QCB63643
LinkDB
All DBs
Position
619019..620974
Genome browser
AA seq
651 aa
AA seq
DB search
MTNLEKMREKLQNQINYHNILYYQKSKPEISDAEYDELKKKLAAIEPEAYATQDSVGAPP
DERFSKMEHQEPMLSLENAYDEQGVEKFLSKIKRFLIADEIEILCEPKIDGLSFSAIYED
GKFVKAATRGDGFVGEDVTHNVATIKGFPKFLQDVQGRLEVRGEIYISNSDFLKLNENNE
FANPRNAAAGSLKQLNANITAKRPLRYFAYSLIGGIEKSQSEILEKLEKFGFCVNEHRSL
TRSLNGMLKFYNEIYDCRYNLDYDIDGIVYKVNDLVLQSRLGSTHKAPRSALAYKFSAIY
AKTKLNKIFIQVGRTGVLTPVADLVPVNIGGVLVSRASLHNQDEIKRKDIREGDVVTIKR
AGDVIPQIVKVDEGSRHTNMPEFVFPDICPECGSKVQIEGVAVRCPEEFNCKAQIVEKLK
HFVSKDAFDIVGLGEKQIKFFYDLSLIRQIPDIFILEERLKEFSLKEHHGWGEKSIANLL
SAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYDNWYNSMSSNDVELVGIDGIGE
KVAESLKSFFSQERNIKMLNDLTAYLQILPVSSNSSDSFLNNKIIVFTGKLRAMSRGEAK
VRAKVLGAKISSSLSTKTDYLIAGEDPGSKYKKAMELGVEILDEEQWNKLC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactaacttggaaaagatgagagaaaaactgcagaaccaaattaattaccataatatc
ttatattatcaaaaaagtaagccagagataagtgatgctgaatatgatgaactgaaaaaa
aagttagctgcaatagagccagaagcttatgcaacacaagatagtgttggtgctccgcct
gatgagagattttctaagatggaacatcaagaacctatgctttctcttgagaatgcttat
gatgaacaaggtgtagaaaaatttttgtctaaaataaagagatttttaattgcagatgaa
atagagatattatgtgagccaaaaattgatggattgtcattttctgcaatttatgaagat
gggaaatttgttaaagctgcaactcgaggtgacggttttgtaggagaggatgtaactcac
aatgttgcaacaataaaaggctttcctaagtttttacaagatgtgcaaggaagactagaa
gtaaggggtgaaatatatatcagtaacagcgactttttaaagttaaatgaaaataatgaa
ttcgctaatcctcgaaatgcagctgctggttctttaaagcaattgaatgcgaacattaca
gcaaaaaggcctcttagatattttgcttattctttaattggtggaatagagaaaagtcaa
agtgagatactagaaaagcttgagaaatttggtttttgcgtaaatgagcatcgttcctta
acacgtagtttgaatggaatgctaaagttctataacgagatctatgattgtcgttataac
ttggattatgatatcgatgggatagtctataaagtgaatgatttggtgctacaaagtcgt
ctgggaagtacacacaaagcgccacgctcagcgcttgcatataagttttctgcgatttat
gcgaagacaaagttaaataaaatatttatacaggtgggtagaacgggggttttaactcca
gttgcagatttggtaccagtcaatattggcggagtgctagttagcagagcaagtctacat
aaccaagatgagataaaacgtaaagatataagagaaggagatgttgtaacaattaaaaga
gctggagatgtaattcctcaaattgtcaaagtagatgaaggttctcgtcatacaaatatg
cctgaatttgtttttcctgacatatgtcctgaatgtggtagtaaagtgcagattgaagga
gtggcagtaagatgtcctgaagaatttaattgcaaggctcaaatagtagaaaaactaaaa
cattttgtgtcaaaagatgcatttgacattgttggccttggtgaaaaacaaataaagttt
ttttatgatcttagcctaataagacaaattccagacatttttattttagaggaaagatta
aaagagttttccttaaaagagcatcatggttggggcgagaagtcaatagctaatctatta
agtgctatacaaaacagaagagtaatcactctagataggttcatattttctttgggtatc
agatttatcggccaagttgcagcagaattgctcgcaaattattatgtatcttatgataac
tggtataattcgatgtcatcaaatgatgttgagttggtaggtatagatggtataggagaa
aaagtagctgaatctttaaaatcgtttttttctcaggaacgtaacattaaaatgttaaat
gatcttactgcatatctgcaaattcttcccgtgagctccaactctagcgattcttttttg
aataacaaaattatagtgtttactggtaagctacgtgctatgagcagaggggaggcaaaa
gtaagagctaaagttttaggggcaaagatcagttcaagcctttctactaaaactgactat
ttaattgcaggagaagatccaggttcaaaatataaaaaagcaatggaattgggtgtggaa
attttagatgaagaacagtggaacaaattgtgctaa
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