Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis: GOY12_01365
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Entry
GOY12_01365 CDS
T07699
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wef
Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis
Pathway
wef03030
DNA replication
wef03410
Base excision repair
wef03420
Nucleotide excision repair
wef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOY12_01365 (ligA)
03410 Base excision repair
GOY12_01365 (ligA)
03420 Nucleotide excision repair
GOY12_01365 (ligA)
03430 Mismatch repair
GOY12_01365 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wef03032
]
GOY12_01365 (ligA)
03400 DNA repair and recombination proteins [BR:
wef03400
]
GOY12_01365 (ligA)
Enzymes [BR:
wef01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GOY12_01365 (ligA)
DNA replication proteins [BR:
wef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GOY12_01365 (ligA)
DNA repair and recombination proteins [BR:
wef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GOY12_01365 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOY12_01365 (ligA)
MMR (mismatch excision repair)
DNA ligase
GOY12_01365 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GOY12_01365 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
Nlig-Ia
PTCB-BRCT
DNA_ligase_ZBD
RNA_ligase
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QKX02215
UniProt:
A0A7Z3DY88
LinkDB
All DBs
Position
341563..343611
Genome browser
AA seq
682 aa
AA seq
DB search
MINLENLKRELVKLQMQMNYHDILYHQKNKPEITDAEYDELKRKVAEIEIQLPGIYAIRK
GVGAPPDERFSKVKHQEPMLSLENAYDEQGVERFLSRVKRFLIENEIEILCEPKIDGLSF
SVVYEDGKFIKAATRGDGFIGEDVTRNVATIKGFPKFLQGVRGRLEVRGEIYISNSDFLS
LNENNEFANPRNAAAGSLKQLDANITASRPLKYFAYSLIGGGEKSQSEVLDRLKALGFCV
NEHQSLTSSLDGMLKFYNEVCNYRYSLDYNIDGIVYKINDLILQNRLGNTNKAPRSALAY
KFSAVYAKTKLKKIFIQVGRTGILTPVASLVPVNIGGVLVSRASLHNHDEVRRKDIREGD
IVIIKRSGDVIPQIDRVEEGSRRIGMPEFVFPEKCPECGSKIQVERVAIRCPEEFTCRAQ
VIEKLKHFVSKDAFDVIGLGEKQISFFYNLGLIKKTPDIFALEKKLNEFNLEGQSGWGKK
SLTSLLNAIQSRKVITLDRFIFSLGIRFIGQVTAGLLANYYGSYDVWYNSMIKLVSSDIE
IDIGSTEKKTAKSSSDELIGIDGIGKKVVESLKSFFSRERNIKMINDLITYLQILPVISN
SSNSVLNNKIVVFTGKLLTMSRGEAKVKAKALGAKISSSLSNKTDYLIVGGDPGSKYKKA
VELGVEILDEGQWHRMINLKNV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttagaaaatttgaaacgagagcttgttaaattgcaaatgcaaatgaactat
catgatattttataccatcagaagaataagccggaaatcactgatgctgagtatgatgag
ctaaagcgaaaagtggctgaaatagagatacaacttccaggaatttatgcaatacggaag
ggtgttggtgctccgcctgatgagaggttttctaaggtgaagcatcaagaacctatgctt
tcccttgaaaatgcttatgatgaacaaggtgtagagagatttttatctagggtaaagagg
ttcttaattgaaaatgaaatagaaatattatgtgaaccaaaaattgatgggttatcattt
tctgtagtctatgaggatgggaaatttattaaagctgcaactagaggtgatggctttata
ggagaggatgttactcgcaatgttgcgacaataaaaggctttcctaagtttttgcaaggt
gtacgtggcaggttagaagttaggggtgaaatatatatcagtaacagtgattttttaagt
ctaaatgaaaataatgagtttgctaatcctcgaaatgcagctgctggttctttaaagcaa
ttagatgcaaacattacagcaagtagaccacttaaatattttgcctattctttaattggt
gggggagaaaaaagccaaagtgaagtgttagataggcttaaggcacttggtttttgtgta
aatgaacatcaatctttaacaagtagtttggatggaatgttgaagttttataatgaggtc
tgtaattatcgctatagcttagactataatattgatggaatagtttataaaattaatgat
ttaatactgcaaaatcgtttagggaacactaacaaagcaccgcgttcggcgcttgcatac
aaattttctgcggtttacgcgaaaacaaaattgaaaaaaatatttatacaggtaggtaga
acaggaattttaactccagttgcaagtttagtaccagttaatattggtggagtgctagtt
agtagggcaagcctgcataaccatgatgaggtaaggcgtaaagacataagagaaggagat
atcgtaataattaaaagatcaggagacgtaattcctcaaattgatagagtagaggagggt
tctcgtcgtataggtatgcctgaatttgtatttcctgaaaaatgtcctgaatgtggtagt
aagatacaggttgaaagggtagcaataagatgtcctgaagaatttacctgtagagctcaa
gttatagaaaaactgaagcattttgtatcaaaagatgcgtttgacgttattggccttggt
gaaaagcagataagttttttttataaccttggcctaataaaaaaaactccagatattttt
gccttggaaaaaaaattaaatgaatttaatctagaaggtcagtctggttggggcaagaaa
tcactaactagtttattgaatgctatacaaagcagaaaggtaataactctagataggttt
atattttctttgggtattagatttattggccaagttacagcaggattgcttgcaaattat
tatggttcttatgatgtctggtacaactcgatgattaaactggtatcaagtgatattgag
atagatataggtagtacagagaagaaaacggctaagtcttctagtgatgagctgataggt
atagatggaataggaaaaaaagtggtagagtctttgaaatcgtttttttccagggaacgt
aacatcaaaatgataaatgatctgattacttatcttcaaatccttcctgtgatctctaat
tctagcaattctgttttaaacaataaaattgtagtgtttactggtaagttacttactatg
agtagaggagaagcaaaagtaaaagctaaagctttaggggcaaaaatcagctcaagtctc
tcgaataaaactgactatctaattgtaggaggagatccaggatctaaatacaaaaaagca
gtggaactaggtgtagaaattttagatgaaggtcagtggcatagaatgataaatttaaaa
aatgtctaa
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