Wolbachia endosymbiont of Anopheles demeilloni: JSQ73_006515
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Entry
JSQ73_006515 CDS
T07801
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wep
Wolbachia endosymbiont of Anopheles demeilloni
Pathway
wep03030
DNA replication
wep03410
Base excision repair
wep03420
Nucleotide excision repair
wep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSQ73_006515 (ligA)
03410 Base excision repair
JSQ73_006515 (ligA)
03420 Nucleotide excision repair
JSQ73_006515 (ligA)
03430 Mismatch repair
JSQ73_006515 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wep03032
]
JSQ73_006515 (ligA)
03400 DNA repair and recombination proteins [BR:
wep03400
]
JSQ73_006515 (ligA)
Enzymes [BR:
wep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JSQ73_006515 (ligA)
DNA replication proteins [BR:
wep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JSQ73_006515 (ligA)
DNA repair and recombination proteins [BR:
wep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JSQ73_006515 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSQ73_006515 (ligA)
MMR (mismatch excision repair)
DNA ligase
JSQ73_006515 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JSQ73_006515 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
Nlig-Ia
PTCB-BRCT
DNA_ligase_ZBD
HHH
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
UIP92763
LinkDB
All DBs
Position
1211553..1213508
Genome browser
AA seq
651 aa
AA seq
DB search
MTDLEKMREKLQNQINYHNILYYQKSKPEISDSEYDELKKKLAAIEPEAYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIADEIEILCEPKIDGLSFSAIYED
GKFVKAATRGDGFVGEDVTHNVATIKDFPKFLQDVQGRLEIRGEIYISNSDFLKLNENNE
FANPRNAAAGSLKQLNENITAKRPLRYFAYSLIGGIEKSQSEILEKLEKFGFCVNEHRSL
TSSLNGMLKFYNEIYDCRYNLDYDIDGIVYKVNDLVLQSRLGSTHKAPRSALAYKFSAIY
AKTKLNKIFIQVGRTGVLTPVADLVPVNIGGVLVSRASLHNQDEIKRKDIREGDVVTIKR
AGDVIPQIVKVDEGSRHTNMPEFVFPDICPECGSKVQIKGVAIRCPEEFNCKAQIVEKLK
HFVSKDAFDIVGLGEKQIKFFYDLSLIRQIPDIFILEERLKEFSLKEHHGWGEKSIANLL
SAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYDNWYNSMSSNDVELVGIDGIGE
KVAESLKSFFSQERNIKMLNDLTAYLQILPASSNSSDSFLNNKIIVFTGKLRAMSRGEAK
VRAKVLGAKISSSLSTKTDYLIAGEDPGSKYKKAMELGVEILDEEQWNKLC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttggaaaagatgagagaaaaactgcaaaatcaaattaattatcataatatc
ttatattatcaaaaaagtaagccagagataagtgattctgaatacgatgaactgaagaaa
aagttagctgcaatagagccagaagcttatgcaacacaagatagtgttggtgctccgcct
gatgagagattttctaaggtggaacatcaagaacctatgctttctcttgagaatgcttat
gatgagcaaggtgtagaaaaatttttatctaaaataaagagatttttaattgcagatgaa
atagaaatactatgtgagccaaaaattgatggattgtcattttctgcaatttatgaagat
gggaaatttgttaaagctgcaactcgaggtgacggttttgtaggagaggatgttactcac
aatgttgcaacaataaaagactttcctaagtttttacaagatgtgcaaggaagactagaa
ataaggggtgaaatatatatcagtaacagcgactttttaaagttaaatgaaaataatgaa
ttcgctaatcctcgaaatgcagctgctggttctttaaagcaattgaatgagaacattaca
gcaaaaaggcctcttagatattttgcttattctttaattggtggaatagagaaaagtcaa
agtgagatactagaaaagcttgagaaatttggtttttgcgtaaatgagcatcgttcctta
acaagtagtttgaatggaatgttaaagttctataacgagatctatgattgtcgttataac
ttggattatgatatcgatggaatagtctataaagtgaatgatttggtgctacaaagtcgt
ctgggaagtacacacaaagcgccacgctcagcacttgcatataagttttctgcgatttat
gcgaagacaaagttaaataaaatatttatacaggtgggtagaacgggggttttaactcca
gttgcagatttagtaccagtcaatattggtggagtattagttagcagagcaagtctacat
aaccaagatgagataaaacgtaaagatataagagagggagatgttgtaacaattaaaagg
gctggggatgtaattcctcaaattgtcaaagtagatgaaggttctcgtcatacaaatatg
cctgaatttgtttttcctgacatatgtcctgaatgtggtagtaaagtgcagattaaagga
gtggcaataagatgtcctgaagaatttaattgcaaggctcaaatagtagaaaaactaaaa
cattttgtgtcaaaagatgcatttgacattgttggccttggtgaaaaacaaataaagttt
ttttatgatcttagcctaataagacaaattccagacatttttattttagaggaaagatta
aaagagttttccttaaaagagcatcatggttggggcgagaagtcaatagctaatctatta
agtgctatacaaaacagaagagtaatcactctagataggttcatattttctttgggtatc
agatttatcggtcaagttgcagcagaattgctcgcaaattattatgtatcttatgataac
tggtataattcgatgtcatcaaatgatgttgagttggtaggtatagatggtataggagaa
aaagtagctgaatctttaaaatcgtttttttctcaggaacgtaacattaaaatgttaaat
gaccttactgcatatctgcaaattcttcccgcgagctccaactctagcgattcttttttg
aataacaaaattatagtgtttactggtaagctacgtgctatgagcagaggggaggcaaaa
gtaagagctaaagttttaggggcaaagatcagttcaagcctttctactaaaactgactat
ttaattgcaggagaagatccaggttcaaaatataaaaaagcaatggaattgggtgtggaa
attttagatgaagaacagtggaacaaattgtgctaa
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