Wolbachia endosymbiont of Dipetalonema caudispina: GOY14_01405
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Entry
GOY14_01405 CDS
T08165
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
weu
Wolbachia endosymbiont of Dipetalonema caudispina
Pathway
weu03030
DNA replication
weu03410
Base excision repair
weu03420
Nucleotide excision repair
weu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
weu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOY14_01405 (ligA)
03410 Base excision repair
GOY14_01405 (ligA)
03420 Nucleotide excision repair
GOY14_01405 (ligA)
03430 Mismatch repair
GOY14_01405 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
weu03032
]
GOY14_01405 (ligA)
03400 DNA repair and recombination proteins [BR:
weu03400
]
GOY14_01405 (ligA)
Enzymes [BR:
weu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GOY14_01405 (ligA)
DNA replication proteins [BR:
weu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GOY14_01405 (ligA)
DNA repair and recombination proteins [BR:
weu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GOY14_01405 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOY14_01405 (ligA)
MMR (mismatch excision repair)
DNA ligase
GOY14_01405 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GOY14_01405 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
RNA_ligase
SHOCT
Motif
Other DBs
NCBI-ProteinID:
QKX00995
UniProt:
A0A7Z3HUY0
LinkDB
All DBs
Position
376643..378715
Genome browser
AA seq
690 aa
AA seq
DB search
MANLENLRQELAELRIQMNYHNVLYYQKSKPEITDAEYDELKRKIAEIEVQLPEVHIMRD
SVGSAPDERFFKVRHQKPMLSLDNVYDEQGVKRFLFKVKRFLIESEVEILCEPKVDGLSF
SAVYENGGFVKAATRGNGFIGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLR
LNENNEFASPRNAAAGSLKQLNARITASRPLRYFAYFLIGGIEKSQCEILEKLEALGFCV
NKHRFLTNNLDGMLRFYDEMYDCRYNLDYDIDGIVYKVNDLALQNRLGNTHKAPRSALAY
KFSAVYAKTKLNKIFIQIGRTGVLTPVASLVPVNIGGVLISKASLHNQNEIKRKDIREGD
IVIIKRAGEVIPQIVEVDKVSRYTNVSEFVFPKKCPECGSELQIEGVIIRCPGEFTCKAQ
IIEKLKHFVSKDAFDIIGLGEKQIKFFYELGLIRRIPDIFALEEKLSRFNLENQSGWGEK
SLANLLNAIRRKKVVTLDRLIFSLGIRFVGQVIAGLLAKYYVSYDIWYSSMIRLLSTDIE
TDMSNIKEETIKFYSHELIGIDGIGEKVVESLKLFFSKELNIKMLNDLIIYIQILPMSSN
SSNSILNNKIVVFTGKLLGMSREEAKVRAKALGAKISSSLSTKTDYLVAGGDSGAKYRKA
VELGIKILSEDQWYKIINFEVPSNNYHTLR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttagaaaatttaagacaagagcttgctgagttaagaatacagatgaattat
cataatgttttatattatcaaaaaagtaagccagagattactgatgctgaatacgatgag
ctgaagcgtaagatagctgaaatcgaagtgcaacttccggaagttcatataatgcgggac
agtgttggttctgcaccggatgaaagattttttaaggtgagacatcaaaagcctatgctt
tctcttgataatgtttatgatgagcaaggtgtaaagcggtttttgtttaaggtaaagaga
tttttaattgagagtgaagtagaaatattatgtgagccaaaggttgatgggttatcattt
tctgcagtatatgagaatggtggatttgttaaagctgcaactcgtggcaatggttttata
ggagaagatgttactcacaatgttgcaacaataaaaggttttcctaagtttttacaaggt
gtacaaggtaggttagaggttaggggtgaaatatatattagtaatagtgattttttaaga
ttaaatgaaaacaatgagtttgctagtcctcgaaatgcagctgccggttctctgaaacag
ttaaatgcaagaattacagcaagtaggccactcaggtattttgcttattttttaattggt
ggaatagaaaaaagccagtgtgagatactagagaaacttgaggcactgggtttttgtgta
aataagcatcgttttttgacgaataatttagatggaatgttgagattttatgatgaaatg
tatgattgtcgctataatttagattatgatattgatggaatagtttataaagtgaatgat
ttggcgctacaaaatcgtttaggaaacactcataaagcaccacgttcagcacttgcatac
aaattttctgcggtttatgcaaagacaaaattgaacaaaatatttatacagataggtagg
acaggggttttaactccggttgctagtttagtaccagttaatattggtggagtgctaatt
agcaaagcaagtttgcataatcaaaatgagataaagcgtaaagacataagagagggtgat
attgtaataatcaaaagggcaggagaagtaattcctcaaattgttgaggtagacaaagtt
tctcgttatacaaacgtgtctgagtttgtatttcctaaaaaatgtcctgagtgtgggagt
gagttacagattgagggagtaataataagatgtcctggggagtttacttgtaaagctcaa
ataatagaaaagttgaaacattttgtatcaaaagatgcatttgacattattggtcttggt
gaaaagcagataaaatttttttatgaacttggtttgataagaagaattccagatattttt
gctttagaagaaaaattaagtagatttaatctggaaaatcagtctggctggggtgagaaa
tcattagctaatttattaaatgctatacgaaggaaaaaggtagtaactttagatagatta
atattttctttaggtattagatttgttggtcaggttatagcaggattacttgcaaagtat
tatgtttcttatgatatctggtatagctcaatgataagattattatcaactgatattgag
acggatatgagtaacataaaagaagagacgattaaattttatagtcatgagctgataggt
atagatggaataggagaaaaagtggtagagtccttgaaattatttttttctaaagaatta
aatattaagatgttaaatgatttgattatttatattcaaatccttcctatgagttcgaat
tctagcaattctattctaaataataaaattgtagtgtttactggtaaactacttggtatg
agtagagaagaggcaaaagttagagctaaagctttaggagcaaaaattagctcaagtctt
tctactaaaactgactatctagttgcagggggagattcaggtgctaagtataggaaagca
gtggaattaggtataaaaattttaagcgaagatcagtggtataaaataataaattttgaa
gtacctagtaataactatcatactcttaggtag
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