Wolbachia endosymbiont of Drosophila pseudotakahashii: ONI09_02350
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Entry
ONI09_02350 CDS
T08705
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wev
Wolbachia endosymbiont of Drosophila pseudotakahashii
Pathway
wev03030
DNA replication
wev03410
Base excision repair
wev03420
Nucleotide excision repair
wev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ONI09_02350 (ligA)
03410 Base excision repair
ONI09_02350 (ligA)
03420 Nucleotide excision repair
ONI09_02350 (ligA)
03430 Mismatch repair
ONI09_02350 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wev03032
]
ONI09_02350 (ligA)
03400 DNA repair and recombination proteins [BR:
wev03400
]
ONI09_02350 (ligA)
Enzymes [BR:
wev01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ONI09_02350 (ligA)
DNA replication proteins [BR:
wev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ONI09_02350 (ligA)
DNA repair and recombination proteins [BR:
wev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ONI09_02350 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ONI09_02350 (ligA)
MMR (mismatch excision repair)
DNA ligase
ONI09_02350 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ONI09_02350 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
zf-NADH-PPase
TraI_2B
SHOCT
DNA_RNApol_7kD
Motif
Other DBs
NCBI-ProteinID:
UZE38943
UniProt:
A0AA47A326
LinkDB
All DBs
Position
455816..457804
Genome browser
AA seq
662 aa
AA seq
DB search
MTNLEKMREKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYED
GRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDE
FANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEILNKLEALGFCVNEHQSL
TSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKVPRSALAYKFSAVY
AKTKLNKIFIQVGRTGVLTPVADLVPVNIGGVLVSRASLHNQDEIKRKDIREGDIVTIKR
AGDVIPQIVEVSRDSRLPNTPEFVFPEVCPECGSKVRQVEGEAAVRCPEEFACKAQIIEK
LKHFVSKDAFDIVGLGDKQIEFFYDLGLIKQIPDIFTLEERLDEFNLEEQSGWGKKSIAH
LLNAIQSRRVITLDRFIFSLGIRFIGQVAAELLADYYVSYDNWYNSMIELSSDNTELVGI
DGIGKKVAESLESFFSKEHNIKMLNDLTACLQILPVSSNSSNSVLNNKIIVFTGKLLAMS
RGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQWHKVISLGV
FK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactaacttagaaaagatgagagaaaaactgcaagatcaaataaattatcataatgtt
ttgtatcaccaaaaaaataagccagaaataagtgatgctgaatatgatgaactgaagaaa
aagttagctgaaatagagccagaaatttatgcaacacaagatagtgttggtgctccacct
gatgagaggttttctaaggtggaacatcaagaacctatgctttcccttgagaatgcttat
gatgaacaaggtgtagagaaatttttgtctaaaataaagaggtttttaattgaggacaaa
atagagatattatgtgaaccaaaaattgatgggttgtcgttttctgcaatttatgaggat
ggaagatttgttaaagctgcaactcgaggtgatggttttgtaggggaagatgtcactcac
aatgttgcaacaataaaaggctttcctaagtttttgcaaggtgtgcaaggaagactagaa
gtaagaggtgaaatatacatcagtaacagcgactttttaaagttaaatgaaaacgatgaa
tttgccaatcctcgaaatgcagccgctggttctttaaagcaattggatgcaaacattaca
gcaagtagacctcttagatattttgcttattctttaattggtggagcagagaaaagtcaa
agtgaaatactaaataagcttgaggcacttggtttttgcgtaaatgagcatcagtcctta
acgagtagtttggatggaatgctgaagttctataacgaagtctataactgtcgctataac
ttggattatgatattgatggaatagtctataaagtaaatgatttggtactacaaaatcgt
ctagggaatactcacaaagtaccgcgctcagcacttgcatacaagttttctgcggtttat
gcaaaaacaaagttaaataagatatttatacaggtgggcagaacaggggttttaactcca
gttgcagatttagtgccagtcaatattggtggggtgctagttagtagagcaagtctgcat
aaccaagatgagataaaacgtaaagacataagagagggagatattgtaacaatcaaaagg
gcaggggatgtaattccccagatcgttgaagtaagcagagattctcgtcttccaaataca
cctgaatttgtgtttcctgaagtatgccctgaatgtggtagtaaagtacgtcaggttgag
ggagaggctgcagtaagatgtcctgaggaatttgcctgtaaagctcaaataatagaaaaa
ctaaagcattttgtatcgaaagatgcatttgacattgttggccttggtgataagcagata
gagtttttttacgaccttggtctgataaaacaaattcccgatatttttactttagaagaa
agattggatgaatttaatctggaagaacagtctggttggggcaagaaatcaatagctcat
ttattaaatgctatacaaagcagaagggtaataactctagataggtttatattttcttta
ggtattagatttattggccaagttgcagcagaattgcttgcagattattatgtttcttat
gataattggtataattcgatgattgaactgtcatcagataatactgagctagtgggtata
gacggcataggaaaaaaagtggctgaatctttggaatcatttttttctaaggaacataac
atcaaaatgttaaatgatcttactgcttgtcttcaaattcttcctgtgagctccaactct
agtaactctgttttaaataataaaattatagtgtttactggtaagctacttgctatgagt
agaggagaggcaaaagtaagagccaaaactctaggagcaaaggtcagctcacatctttct
gctaaaactgactacctaattgcaggagaaaaaccaggatccaaatataaaaaggcagtg
gaattaggtgtagaaattttagatgaagatcagtggcataaagtgataagtttgggagtg
ttcaaatga
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