Wolbachia endosymbiont of Drosophila pseudotakahashii: ONI09_03570
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Entry
ONI09_03570 CDS
T08705
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wev
Wolbachia endosymbiont of Drosophila pseudotakahashii
Pathway
wev03030
DNA replication
wev03410
Base excision repair
wev03420
Nucleotide excision repair
wev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ONI09_03570 (ligA)
03410 Base excision repair
ONI09_03570 (ligA)
03420 Nucleotide excision repair
ONI09_03570 (ligA)
03430 Mismatch repair
ONI09_03570 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wev03032
]
ONI09_03570 (ligA)
03400 DNA repair and recombination proteins [BR:
wev03400
]
ONI09_03570 (ligA)
Enzymes [BR:
wev01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ONI09_03570 (ligA)
DNA replication proteins [BR:
wev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ONI09_03570 (ligA)
DNA repair and recombination proteins [BR:
wev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ONI09_03570 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ONI09_03570 (ligA)
MMR (mismatch excision repair)
DNA ligase
ONI09_03570 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ONI09_03570 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
UZE37993
UniProt:
A0AA46WBM6
LinkDB
All DBs
Position
681561..683255
Genome browser
AA seq
564 aa
AA seq
DB search
MNKNALQEEIKRHNELYYRENISEITDAEYDELVKKVDVQIVGAAPDDRFSKVQHIVPML
SLNKVYSQEDIEEFIAKSRELLNTDELEIMCELKIDGLSFTAIYEDGMLIKGLTRGDGHY
GEDVTKNAATIEGLPKVLPDVKGRLEVRSEVYLRNDDFLKLNKDNQFSNPRNTASGSLRQ
LDPEVTASRSLRYFAYSLISGGTEKTQLEVLDRLKELGFCVNEHQCLAKNVDEMLEFYNR
IYDNRHELGYDIDGIVYKINNLELQDRLGSTNKAPRGAIAHKFPAAQGKTKIVKILIQVG
KTGKLNPGAKVIPINIGGVLITRVNLHNKGEIKRKDIREGDIVTIKRAGDVIPKIIDVDK
SARSQKAPKFVFPDICPECGSRVDDWEATIRCTGENVCPAQRIGKLKHFVEVLDIKGFGG
KQVEFLYDLGLIRKISDIFALEEKLKNFNLSEQRGWDKQSIFNLLHSINSKRTVTLEKFI
TSLGIKLVGPHVAKLLAKDYQSYENWMAQLPYDREAPDKLMIIGVGEETITSLEEFFSDE
DNVEMVKNLASQLKIEPVSAKFPS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgcattacaagaagaaataaaacgccacaatgagttgtactatcgggaa
aatatatcagaaataaccgatgcagaatacgatgagctggtgaaaaaagtagatgtacaa
attgtaggtgctgcacctgatgataggttttccaaggtacagcatattgtgcctatgctc
tcgttaaacaaagtttacagccaagaagacattgaagaatttattgctaagtccagagaa
ctcctaaatacagatgagctggagataatgtgcgagctgaaaattgatggcttaagtttc
actgcaatttatgaggatggtatgttgattaaaggtttaactcgaggtgatggccattac
ggtgaagacgttacaaaaaatgccgcaactatagaaggattacctaaagttttacctgat
gtaaagggcagattggaagttaggagcgaggtatatctaagaaatgatgattttttaaaa
ttaaataaggataaccaattttcaaatccgcgcaatacggcatccggttcactaagacaa
ttggacccagaagtcaccgccagtagatcgctcaggtactttgcctattctttgattagt
ggtggaacagaaaagacccagcttgaagtattagataggctgaaggaacttggattctgt
gtaaatgaacatcaatgcttagcaaaaaatgtggacgaaatgctggaattctacaacaga
atctatgataatcgccatgaattaggttatgatattgatggaatagtctataaaatcaac
aacttagagttgcaagatcgtctaggtagtaccaataaagcaccaagaggagctatagct
cataaatttcctgcagctcaaggaaaaactaagatagttaaaatattaatacaagtaggc
aaaacgggtaaattgaatccgggtgcaaaagtaattccaataaatataggaggggttctc
attacaagggtaaatttgcataataagggtgaaattaagcgtaaggacataagggaagga
gatattgtaacaatcaaaagggcaggagatgtgattcctaaaattatagatgtagataaa
agtgctcgttctcaaaaagcaccaaagtttgtttttcctgatatttgcccggaatgtgga
agtagagttgatgactgggaagctacgattagatgtaccggagaaaacgtttgcccagca
cagcgaataggaaagttaaaacattttgtggaagttcttgacattaaaggttttggcggt
aaacaagtggagttcctttatgaccttggtttgataaggaaaatatctgatatttttgct
ctcgaagaaaaactcaaaaatttcaacttaagtgaacaaaggggatgggataaacaatcc
atatttaatttattgcactctatcaacagcaaaagaactgtaacgcttgaaaagtttata
acttctttgggaattaaattggtcggaccacacgtagcaaaattactagcaaaagattat
caatcttatgaaaattggatggctcaattaccttatgatagagaagctcctgataaatta
atgataataggcgtaggcgaagagaccataacttccttggaggaatttttctctgatgag
gataatgttgaaatggtaaagaatctcgcctctcaactaaagattgagcctgtaagtgct
aaattcccctcttag
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