Wolbachia endosymbiont of Drosophila yakuba: wYak_05170
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Entry
wYak_05170 CDS
T07657
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wey
Wolbachia endosymbiont of Drosophila yakuba
Pathway
wey03030
DNA replication
wey03410
Base excision repair
wey03420
Nucleotide excision repair
wey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
wYak_05170
03410 Base excision repair
wYak_05170
03420 Nucleotide excision repair
wYak_05170
03430 Mismatch repair
wYak_05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wey03032
]
wYak_05170
03400 DNA repair and recombination proteins [BR:
wey03400
]
wYak_05170
Enzymes [BR:
wey01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
wYak_05170
DNA replication proteins [BR:
wey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
wYak_05170
DNA repair and recombination proteins [BR:
wey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
wYak_05170
NER (nucleotide excision repair)
GGR (global genome repair) factors
wYak_05170
MMR (mismatch excision repair)
DNA ligase
wYak_05170
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
wYak_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
Zn_ribbon_NUD
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
QVU15710
LinkDB
All DBs
Position
complement(591842..593830)
Genome browser
AA seq
662 aa
AA seq
DB search
MTNLEKMREKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYED
GRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDE
FANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSL
TSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFSAVY
AKTKLNKIFIQVGRTGVLTPVADLVPVNVGGVLVSRASLHNQDEIKRKDIREGDIVTIKR
AGDVIPQIVEVSRDSRLPNTPEFVFPEVCPECGSKVRQVEGEAAVRCPEEFACKAQMIEK
LKHFVSKDAFDIVGLGDKQIEFFYDLGLIKQIHDIFTLEERLDEFNLEEQSGWGEKSIAN
LLNSIQSRRVITLDRFIFSLGIRFIGQVAAELLADYYISYNNWYNSMIELSLDNTELVGI
DGIGKKGAESLESFFSKEHNIKMLNDLTACLQILPVSSNSSNSVLNNKIIVFTGKLLAMS
RGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQWHKVISLGV
FK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactaacttagaaaagatgagagaaaaactgcaagatcaaataaattatcataatgtt
ttgtatcaccaaaaaaataagccagaaataagtgatgctgaatatgatgaactgaagaaa
aagttagctgaaatagagccagaaatttatgcaacacaagatagtgttggtgctccacct
gatgagaggttttctaaggtggaacatcaagaacctatgctttcccttgagaatgcttat
gatgaacaaggtgtagagaaatttttgtctaaaataaagaggtttttaattgaggacaaa
atagagatattatgtgaaccaaaaattgatgggttgtcgttttctgcaatttatgaggat
ggaagatttgttaaagctgcaactcgaggtgatggttttgtaggggaagatgtcactcac
aatgttgcaacaataaaaggctttcctaagtttttgcaaggtgtgcaaggaagactagaa
gtaagaggtgaaatatacatcagtaacagcgactttttaaagttaaatgaaaacgatgaa
tttgccaatcctcgaaatgcagccgctggttctctaaagcaattggatgcaaacattaca
gcaagcagacctcttagatattttgcttattctttgattggtggagcagagaaaagtcaa
agtgaggtactaaataagcttgaggcacttggtttttgcgtaaatgagcatcagtcctta
acgagtagtttagatggaatgctgaagttctataatgaagtctataactgtcgctataac
ttggattatgatattgatggaatagtctataaagtaaatgatttggtactacaaaatcgt
ctagggaatactcacaaagcaccgcgctcagcacttgcatacaagttttctgcggtttat
gcaaaaacaaagttaaacaagatatttatacaggtgggcagaacaggggttttaactcca
gttgcagatttagtgccagtcaatgttggtggggtgctagttagtagagcaagtctgcat
aaccaagatgagataaaacgtaaagacataagagagggagatattgtaacaatcaaaagg
gcaggtgatgtaattccccagatcgttgaagtaagcagagattctcgtcttccaaataca
cctgaatttgtgtttcctgaagtatgccctgaatgtggtagtaaagtacgtcaggttgag
ggagaggcagcagtaagatgtcctgaggaatttgcctgtaaagctcaaatgatagaaaaa
ctaaagcattttgtatcgaaagatgcatttgacattgttggccttggtgataagcagata
gagtttttttacgaccttggtctgataaaacaaatccatgatatttttactttagaagaa
agattggatgaatttaatctggaagaacagtctggttggggcgagaaatctatagctaat
ttgttaaattctatacaaagcagaagggtaataactctagataggtttatattttcttta
ggtattagatttattggccaagttgcagcagaattgcttgcagattattatatttcttat
aataactggtataattcgatgattgaactgtcattagataatactgagctagtaggtata
gatggcataggaaaaaaaggggctgaatctttggaatcatttttttctaaggaacataac
atcaaaatgttaaatgatcttactgcttgtcttcaaattcttcctgtgagctccaactct
agtaactctgttttaaataataaaattatagtgtttactggtaagctacttgctatgagt
agaggagaggcaaaagtaagagccaaaactctgggagcaaaggtcagctcacatctttct
gctaaaactgactacctaattgcaggagaaaaaccaggatccaaatataaaaaggcagtg
gaattaggtgtagaaattttagatgaagaccagtggcataaagtgataagtttgggagtg
ttcaaatga
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