Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan: WIGMOR_0326
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Entry
WIGMOR_0326 CDS
T01747
Symbol
ligA
Name
(GenBank) DNA ligase, NAD(+)-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wgl
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan
Pathway
wgl03030
DNA replication
wgl03410
Base excision repair
wgl03420
Nucleotide excision repair
wgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WIGMOR_0326 (ligA)
03410 Base excision repair
WIGMOR_0326 (ligA)
03420 Nucleotide excision repair
WIGMOR_0326 (ligA)
03430 Mismatch repair
WIGMOR_0326 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wgl03032
]
WIGMOR_0326 (ligA)
03400 DNA repair and recombination proteins [BR:
wgl03400
]
WIGMOR_0326 (ligA)
Enzymes [BR:
wgl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
WIGMOR_0326 (ligA)
DNA replication proteins [BR:
wgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WIGMOR_0326 (ligA)
DNA repair and recombination proteins [BR:
wgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
WIGMOR_0326 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WIGMOR_0326 (ligA)
MMR (mismatch excision repair)
DNA ligase
WIGMOR_0326 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WIGMOR_0326 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
Nlig-Ia
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AFA41161
UniProt:
H6Q5W5
LinkDB
All DBs
Position
329934..331703
Genome browser
AA seq
589 aa
AA seq
DB search
MSNKYKNIKNRIFYLRKKLNLWSDYYYNKNQSLVEDSVYDFNLLKLSKLEHKYPFLRSQD
SPTQAIGQDCNVKLLQIQHKSLMLSLDSISNNTELFKFNKKIQKILNTGEEITYCCELKI
DGLAINLTYEYGILVRASTRGNGVFGEDVTKNALMMQTIPYNLKTNDTACKYIEIRGEVF
INKSKFFKLNEVAKLNNKKLFSNPRNAASGSLRQINPKITENRYLMFYAYGIGYSDGYKL
PDSQYKRLKILKLWNIPTNHYTKICVGLHQIVNYYNTIKKIRKTLDFEIDGIVIKVDSIL
HQNKIGCVAKAPKWAIAYKFPALEKITKIISVDFTIGRTGIVTPIAQIKPVCFLGTIVKF
VSLYNFNEINRLNVMINDTVIVKHVGEVIPKISKVIFSKRTKNAKKIIFPKKCKICDSDI
ISIVGKKKWYCSGGITCHAQKKAALIHFASRNALNIRGMGKKIISKLVDKKILITPADFF
RLDLKKITRINKIQLKSGKNLINSIKNSKEVKLHRLIYGLGIPQVGLTTSINLENYYKTY
YNFINSDFHSLLKIKDIGQSTAVCIRKFLENKNNISFIQDLLQLNLKIK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaatataaaaatataaaaaatagaatattttatcttcgtaaaaaacttaac
ttgtggtcagattattattataataaaaatcaatctttagttgaagattcagtatacgac
tttaatttattaaaactaagtaaattagaacataaatacccgtttttacgttctcaagat
tcacctacacaagcaataggacaagattgtaatgtaaaacttttacagatacaacataaa
tctttaatgctatctttagatagcatttctaacaacacagaattattcaaattcaataaa
aaaatacaaaaaattctcaataccggagaagaaatcacatattgttgcgaattaaaaatt
gacggattagctataaatttaacatatgaatacggaatactcgttcgagcctctactcga
ggaaatggagtttttggcgaagatgtaacaaaaaatgccttaatgatgcaaacaataccg
tataatttaaaaacaaatgatactgcttgtaaatatatagaaataagaggagaagttttt
attaataaatccaaatttttcaaacttaatgaagtagctaagttaaataataaaaaatta
ttttctaatccgcgtaacgctgcttcgggttctttaagacaaattaatccaaagattaca
gaaaacagatatttaatgttttatgcttatggaattggctactcagatggatataaatta
ccggatagtcagtataaaagattaaaaattttgaaattatggaacataccaactaatcat
tatacaaagatttgcgtaggactacatcaaattgttaattattacaatacaattaaaaaa
attcgaaaaactttagattttgaaatagatggcattgtaataaaagtagactctatatta
catcaaaataaaataggatgtgttgctaaagcaccaaaatgggctatcgcttataagttt
ccagcattagaaaaaattacaaaaatcataagtgtagattttactatcggtcgtacagga
attgtaacacctatagctcaaattaaacctgtatgttttttaggtacaattgtaaaattt
gtttctttatataattttaatgaaataaatagattaaatgttatgattaatgataccgta
attgtaaaacatgtaggagaagtcattcccaaaatttctaaagtaatattttcgaagcgt
acaaaaaatgcaaaaaaaattatttttcctaaaaaatgtaaaatctgcgattcagatatt
ataagtattgtaggcaaaaaaaaatggtactgcagtggaggtatcacatgtcatgcacaa
aaaaaagcagctttaatacattttgcttctcgtaatgctttaaatattcgaggcatggga
aaaaaaataatttctaagctagtagataaaaaaattttaattactccggcagattttttt
cgattagatctcaaaaaaattacacgtattaataaaattcaattgaaatccggaaaaaat
ttaatcaattctattaaaaattctaaagaagtaaaattacatcgtcttatatacggctta
ggtattccccaagtcggattaacaacgtctataaatcttgagaattactataaaacatat
tacaattttataaattctgattttcattcattattaaaaataaaagatataggtcaatct
acagctgtatgtattagaaaatttttagaaaataaaaataacataagttttatacaagat
ttattgcaactaaacttaaaaataaaataa
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