Williamsia herbipolensis: OG579_04295
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Entry
OG579_04295 CDS
T09708
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
whr
Williamsia herbipolensis
Pathway
whr00300
Lysine biosynthesis
whr00550
Peptidoglycan biosynthesis
whr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OG579_04295
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OG579_04295
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
whr01011
]
OG579_04295
Enzymes [BR:
whr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
OG579_04295
Peptidoglycan biosynthesis and degradation proteins [BR:
whr01011
]
Precursor biosynthesis
Amino acid ligase
OG579_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WUM21040
UniProt:
A0AAU4K4Q4
LinkDB
All DBs
Position
complement(951448..953073)
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AA seq
541 aa
AA seq
DB search
MTESGTRHPQPIPAPADPTRPGRVEPCGVDTLAAASGARIDLVGSASPDVGVTGVTLRAQ
DTRPGDLFAALPGARAHGAQFAAQAISAGAAAVLTDSAGAALVTEAMAAADTPTPSFVLL
VHPDPRSVLGDLSARVYGNPSLRLRLIGITGTSGKTTSSYLTEAALMAAGQTVGLIGTVE
TRVAGVRQDSSLTTPEAPALQGMLAAMCEQGVDTVVMEVSSHALELGRVRGSSFAIGGFT
NLSQDHLDFHPTMVDYFEAKARLFRPDSPEHAHRSVVCVDDEWGARMSEIVGHGVVTVST
RHSSADWYAGPSRLRDDGSQVVTVRDPQGTPHTLRVPLPGRYNVANALIALAIADAAGVS
ITDAVAGIAGVAVPGRVELVDEGQDFLAVVDYAHKPAAVEAVIATLRGQTSGRLAVVVGA
GGNRDTGKRPLMGEAAARGAHLVIVTDDNPRDEDPAAIRAEVRAGAEKVARGERPTGSEP
IVEIGDRAAAIAHAVAWARAGDTVLVAGKGHESGQEIAGVKHPFDDRDVVRRALADRQET
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcggggacgcgacacccgcaaccgatcccggcgcccgccgacccgacccga
ccgggccgggtggaaccctgcggggtcgacacgctggccgccgcgtcgggcgcccgtatc
gatctcgtcgggtcggcgtcaccggacgtcggcgtcaccggagtgaccctgcgtgcacag
gacacccgcccgggagatctgttcgcggccctgcccggcgcgcgcgcccacggagcgcag
ttcgccgcccaggccatctccgcaggcgccgcggccgtgctcaccgactccgccggtgcc
gcgctcgtcaccgaggcgatggccgccgcggacacgccgacgccgtcgttcgtactgctc
gtccatcccgatccgcgcagcgtcctcggtgacctcagcgcccgcgtgtacgggaacccg
tcgctgcgactgcgtctgatcggtatcaccgggacctccggcaagaccacctcgagctat
ctcaccgaggccgccctgatggccgcgggtcagaccgtgggactcatcggcaccgtcgag
acacgcgtcgccggtgtgcgccaggacagttcgctcaccacccccgaggcgcccgcgctg
caggggatgctcgccgcgatgtgcgaacagggtgtcgacaccgtggtgatggaggtgtcg
agccacgccctcgagctcggccgggtccgcgggagttccttcgccatcggcggtttcacg
aatctctcgcaggaccacctcgacttccaccccacgatggtcgactacttcgaggcgaaa
gctcgtctgttccggcctgattcgcccgagcacgcccaccgctcggttgtctgcgtcgac
gacgagtggggcgccaggatgtcggagatcgtcggtcacggcgtggtcaccgtgtcgaca
cgccacagctcggccgactggtacgccggaccgtcccggctgcgcgacgacgggtcgcag
gtcgtcaccgtccgcgacccccagggcacaccacacaccctgcgggtgccccttcccggt
cggtacaacgtcgccaacgccctgatcgcgctggccatcgccgacgccgccggggtgtcg
atcaccgacgccgtcgcgggcatcgccggggtcgcggtcccgggtcgtgtcgagctggtc
gacgagggccaggacttcctcgccgtcgtcgactacgcccacaagcccgccgccgtcgag
gcggtcatcgcgaccctgcggggacagaccagcggtcgactcgcggtcgtggtcggtgcc
ggcggcaaccgcgacacaggcaaacgtccgctgatgggggaggccgccgcccggggcgcc
cacctggtgatcgtgaccgacgacaacccccgcgacgaggaccccgccgccatccgcgcc
gaggtgcgagccggcgcagagaaggtggcgcggggcgaacgaccgaccggatcggagccg
atcgtcgagatcggtgaccgagcggccgcgatcgcccacgcggtcgcgtgggcgcgggcc
ggcgacaccgtcctcgtcgcgggcaagggccacgagagcgggcaggagatcgccggcgtg
aagcaccccttcgacgaccgcgacgtggtgcggcgggccctcgccgaccgtcaggagacg
acatga
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