Williamsia herbipolensis: OG579_15450
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Entry
OG579_15450 CDS
T09708
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
whr
Williamsia herbipolensis
Pathway
whr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG579_15450 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
whr03400
]
OG579_15450 (nth)
Enzymes [BR:
whr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OG579_15450 (nth)
DNA repair and recombination proteins [BR:
whr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OG579_15450 (nth)
Prokaryotic type
OG579_15450 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WUM22420
UniProt:
A0AAU4K8M1
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All DBs
Position
3372609..3373289
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AA seq
226 aa
AA seq
DB search
MDRTLQTAFPHVYCELDFTTPLELSVATILSAQCTDVRVNLTTPALFARYPDAAAYAGAD
RTELEEMIRSTGFYRNKATSIIGLGQALLERFDGEVPGRLEDLVTLPGFGRKTANVVLGN
AFGIPGITVDTHFGRLVRRWNWTTETDPVKVEHAVGELIERKNWTDLSHRVIFHGRRVCH
AKKPACGVCVLAKDCPSFGEGPTETEKAASLVKGPETAHLLALAGI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaccctgcagacggcgttcccgcacgtgtactgcgaactcgacttcaccacc
ccgctggagctgtcggtcgcgacgatcctctccgcgcagtgcaccgacgtccgcgtcaac
ctcaccaccccggcgctgttcgcccgctaccccgatgccgccgcctacgccggcgccgac
cgcaccgaactcgaggagatgatccgctcgaccggcttctaccggaacaaggcgacatcg
atcatcggtctcggtcaggcgttgctcgaacggttcgatggcgaggtccccggccgtctc
gaggacctggtgacgctgccgggcttcggacgcaagaccgcgaacgtggtgctcggcaac
gctttcgggatccccggcatcaccgtcgacacccacttcggtcggctggtgcgtcgctgg
aactggaccaccgagaccgatccggtgaaggtcgagcacgccgtcggcgagctgatcgag
cgcaagaactggaccgatctgtcccaccgcgtgatcttccacggccgacgcgtgtgccac
gccaagaagccggcctgcggcgtgtgcgtgctggcgaaggactgcccgtcgttcggtgag
ggaccgaccgagaccgagaaggccgcgtcgctggtcaagggacccgagaccgcgcatctg
ctcgccctggccgggatctga
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