Wallemia ichthyophaga: J056_002463
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Entry
J056_002463 CDS
T03457
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
wic
Wallemia ichthyophaga
Pathway
wic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J056_002463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_002463
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
J056_002463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_25
AAA_28
AAA_16
nSTAND3
AAA_15
Zeta_toxin
Arf
MMR_HSR1
Trans_reg_dom
AAA_23
ORC-CDC6-like
VapE-like_dom
Roc
nSTAND_NTPase5
AAA_27
AAA_22
NACHT
Motif
Other DBs
NCBI-GeneID:
20375415
NCBI-ProteinID:
XP_009270003
UniProt:
R9AAI7
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MVIAISVRNLSFSFNQADETALKNLSMDIEQGSRCLLVGANGAGKSTLLRILAGKRLTKG
HVQVYGKDVFQNQPSGITYLGTEWAMNPVVRGDIRVSEFLDSVGGFRHKDRRDTLLNILD
VDVDWRMHQISDGERRRVQLVMGLMVPWTLLLLDEVTVDLDVVVRTDLINFLIAESKERN
ATILYATHIFDGLFNFPTHVMHMRLGSNVGNPEPWPLVPQSPLHHIIKQSNVEASPLLKL
ALAWLREDLVYRREYEKSIDRQRGARSETTDSETFYSRFDYWKGK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtaattgcaatctcagtcagaaatctatccttctcctttaatcaagcggatgaaact
gcgttgaagaatctcagtatggatattgagcaaggctctagatgcttgctcgttggtgct
aatggcgccgggaaaagtacactgctgaggatcttggcgggcaagcgtctcactaaaggt
catgtacaggtctatggcaaagatgtattccagaatcaacccagtggaattacttattta
ggtacagagtgggccatgaatcccgtcgttcgtggtgatatacgcgtttcagagttcctt
gactcagtcggtggtttcagacacaaggatagaagagatacactgctcaacattctagat
gtggatgttgattggaggatgcatcaaatatctgacggtgaaagacgcagagtccaactt
gtgatgggtttgatggttccttggacgcttttgctgcttgacgaggtcactgtagacctc
gatgtcgtcgtcagaacggacctgataaatttcctcattgcggaatccaaggagagaaac
gcgactatactgtacgccacccacatcttcgacggattgttcaacttccctacacacgtg
atgcatatgagactgggaagcaacgtaggcaaccctgagccatggccgcttgtaccacag
tcaccactgcatcacattatcaaacaatcaaacgtagaagcttcgccactcctcaaactt
gcgctggcttggctgagagaggatctggtgtacagacgcgagtatgaaaagtccatagac
agacagcgtggagcgagatctgaaactacagattcggaaacattttattcaagatttgat
tattggaaagggaaatag
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