Wallemia ichthyophaga: J056_004250
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Entry
J056_004250 CDS
T03457
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03420
Nucleotide excision repair
wic04111
Cell cycle - yeast
wic04120
Ubiquitin mediated proteolysis
wic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
J056_004250
04120 Ubiquitin mediated proteolysis
J056_004250
09124 Replication and repair
03420 Nucleotide excision repair
J056_004250
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
J056_004250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
wic04121
]
J056_004250
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_004250
Enzymes [BR:
wic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
J056_004250
Ubiquitin system [BR:
wic04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
J056_004250
Multi subunit type E3
SCF complex
Ring finger protein
J056_004250
Cul2 complex
J056_004250
Cul3 complex
J056_004250
Cul4 complex
J056_004250
Cul7 complex
J056_004250
Cul8 complex
J056_004250
Cul9 complex
J056_004250
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
J056_004250
TCR (transcription coupled repair) factors
Cul4-CSA complex
J056_004250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
20377202
NCBI-ProteinID:
XP_009267726
UniProt:
R9AGV6
LinkDB
All DBs
Position
Unknown
AA seq
110 aa
AA seq
DB search
MTEDTHQTHQSMDIDKAPPKKPRFQVKKWNAVALWNWDIAVDNCAICRNQIMDLCIECQA
NQASATTNECVVAWGICNHAFHFHCISRWLKTRHVCPLDNREWALQKYGK
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggatactcaccaaacacatcaatcgatggatatcgacaaggccccaccaaag
aagccacgttttcaagtaaaaaagtggaatgccgttgccctgtggaactgggatatcgca
gtagacaactgtgctatctgtagaaaccagataatggatctttgtattgaatgccaagcc
aatcaagcttctgcaacgacaaatgagtgtgtcgttgcctggggaatctgcaaccacgct
ttccactttcattgcatatctcgttggcttaaaacgaggcacgtctgtccactcgataat
cgtgagtgggcgttgcagaagtatggtaagtaa
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