Winogradskyella sp. J14-2: BWZ20_06460
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Entry
BWZ20_06460 CDS
T04714
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
wij
Winogradskyella sp. J14-2
Pathway
wij00300
Lysine biosynthesis
wij00550
Peptidoglycan biosynthesis
wij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
wij00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BWZ20_06460
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BWZ20_06460
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
wij01011
]
BWZ20_06460
Enzymes [BR:
wij01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BWZ20_06460
Peptidoglycan biosynthesis and degradation proteins [BR:
wij01011
]
Precursor biosynthesis
Amino acid ligase
BWZ20_06460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
YqeC
DUF3440
SRP54
MeaB
MobB
LpxK
Motif
Other DBs
NCBI-ProteinID:
APY07966
LinkDB
All DBs
Position
complement(1387467..1388930)
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AA seq
487 aa
AA seq
DB search
MKLLKDILYKVTLNAVVGSTSAAVNKIEFDSRKIETNDVFVAVRGTLTDGHKYIDKAIAD
GATSIVCEVLPETLQDGITYVEVANSNQALAFMAANYFEHPSENLKLVGVTGTNGKTTVT
SLLYQLFKKAGYKVGLLSTVKIMVDNTEYKATHTTPDSLTINKYLKLMNEEGVEFCFMEA
SSHGIHQSRTEGLKFTGGIFTNLSHDHLDYHESFAEYRDVKKSFFDHLPKNAFALSNMDD
KNGLIMLQNTEAKKYTYALKNYSDYRAQILENEFSGLLLKVNDSELWTKLIGSFNAYNIL
AIYGAAELLGLEKDEILRLISELDNVSGRFQYFISDEKITAIVDYAHTPDALKNVLETIN
SIRTKNEELITVVGCGGDRDKTKRPKMAHIASALSTKVIFTSDNPRTEVPEAIIEDMEKG
VEPQNFKKTLSITDRKQAIKTACQMAEAKDIILIAGKGHETYQEIKGERFDFDDYKIVQE
FLKQLQK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactaaaagacatattatacaaggttactttaaatgctgttgtaggtagtaca
agcgctgccgtaaacaaaattgaattcgattctcgtaaaattgaaaccaatgatgttttt
gtggccgtaagaggaacgcttactgatggccataagtatatagataaagcaattgcagat
ggtgcaacatctatagtttgtgaagtgttgcctgaaactttgcaagatggaattacctat
gtggaagttgctaattctaaccaagcattggcttttatggctgcaaattactttgagcac
ccttccgagaatttaaaacttgttggtgttacaggtaccaatggtaaaacaacagtaacg
agtttgttgtatcagttgtttaaaaaagcaggttataaagttggcttattgtctaccgta
aaaattatggtagataataccgaatataaggcaacccatacaacaccagattctttaact
atcaataagtatttaaaacttatgaacgaagaaggtgtggaattttgctttatggaagcg
agttcgcacggtatacatcaaagcagaactgaaggtttaaaatttacaggaggcattttt
acaaatctatctcatgatcatttagattatcatgagtctttcgcagaatacagagatgta
aaaaaatcatttttcgatcacttaccaaaaaatgcatttgcattgtctaatatggatgat
aaaaatggattgataatgcttcaaaatactgaagcgaagaaatatacttatgctttaaag
aattattcagattacagagcacagattttagaaaacgaattcagtggtttgttgttaaag
gtgaatgatagcgagctgtggacaaagcttatcggaagttttaacgcatacaacattttg
gcaatctatggtgcagcagaattattaggcttagaaaaagatgaaattttaaggttaata
agcgaattagataatgtctctggtcgttttcaatattttatttcagacgaaaaaataact
gctattgttgattatgcgcacacgccagatgctctaaaaaatgtactcgaaaccataaat
agtattcgtactaaaaatgaagagctaattacagttgtgggttgtggaggagatagagac
aaaaccaagcggccaaagatggcgcatattgcttcggcattaagcacaaaagtgattttt
acgagcgataatccacgcacagaagttcctgaggcgatcattgaggatatggaaaaagga
gttgagcctcaaaatttcaaaaagacattatcaattacagatagaaaacaagccataaaa
acagcatgtcagatggctgaagctaaagatatcatcttaattgcgggtaaagggcacgag
acgtatcaagaaattaagggcgaacgctttgattttgatgactataaaatagtacaagaa
tttttaaaacaattacagaagtag
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