Wolbachia pipientis: DEJ70_06335
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Entry
DEJ70_06335 CDS
T05842
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wpp
Wolbachia pipientis
Pathway
wpp03030
DNA replication
wpp03410
Base excision repair
wpp03420
Nucleotide excision repair
wpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEJ70_06335
03410 Base excision repair
DEJ70_06335
03420 Nucleotide excision repair
DEJ70_06335
03430 Mismatch repair
DEJ70_06335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wpp03032
]
DEJ70_06335
03400 DNA repair and recombination proteins [BR:
wpp03400
]
DEJ70_06335
Enzymes [BR:
wpp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DEJ70_06335
DNA replication proteins [BR:
wpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DEJ70_06335
DNA repair and recombination proteins [BR:
wpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DEJ70_06335
NER (nucleotide excision repair)
GGR (global genome repair) factors
DEJ70_06335
MMR (mismatch excision repair)
DNA ligase
DEJ70_06335
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DEJ70_06335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
HHH
Motif
Other DBs
NCBI-ProteinID:
QBB84301
LinkDB
All DBs
Position
1297557..1299512
Genome browser
AA seq
651 aa
AA seq
DB search
MTDLEKMREKLQDQINYHNILYYQKSKPEISDAEYDELKKKLAEVEPEAYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIADEIEILCEPKIDGLSFSAIYED
GKFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVEGKLEVRGEIYISNSDFLKLNENNE
FANPRNAAAGSLKQLNANITAKRPLRYFAYSLIGGIEKSQSDILEKLEKFGFCVNEHRSL
TSSLNGMLKFYNEIYDYRYNLDYDIDGIVYKVNDLVLQSRLGSTHKAPRSALAYKFSAVY
AKTKLNKIFIQVGRTGVLTPVADLVPVNIGGVLVSRASLHNQDEIKRKDIREGDVVTIKR
AGDVIPQIVKVDEGSRHTNMPEFVFPDICPECGSKVQIEGVAVRCPKEFNCKAQIVEKLK
HFVSKDAFDIVGLGEKQIKFFYDLELIRQIPDIFILEERLKEFSLKEHHGWGEKSIANLL
SAIKSRRVISLDRFIFSLGIRFIGQVAAELLANYYVSYDNWYNSMSSNDVELVGIDGIGE
KVAESLKSFFSQERNIKMLNDLTAYLQILPVGSNSNDSFLNNKIIVFTGKLRAMSRGEAK
VRAKVLGAKISSSLSTKTDYLIAGEDPGSKYKKAMELGVEILDEEQWNKLC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttggaaaagatgagagaaaaactgcaggaccaaattaattaccataatatc
ttatattatcaaaaaagtaagccagagataagtgacgctgaatatgatgaactgaaaaaa
aaattagctgaagtagagccagaagcttatgcaacacaagatagtgttggtgctccgcct
gatgagagattttctaaggtggaacatcaagaacctatgctttctcttgagaatgcttat
gatgaacaaggtgtagaaaaatttttgtctaaaataaagagatttttaattgcagatgaa
atagagatattatgtgagccaaaaattgatggattgtcattttctgcaatttatgaagat
gggaaatttgttaaagctgcaactcgaggtgacggttttgtaggagaggatgtaactcac
aatgttgcaacaataaaaggctttcctaagtttttacaaggtgtagaaggaaaactagaa
gtaaggggtgaaatatatatcagtaacagcgactttttaaagttaaatgaaaataatgaa
ttcgctaatcctcgaaatgcagctgctggttctttaaagcaattgaatgcgaacattaca
gcaaaaaggcctcttagatattttgcttattctttaattggtggaatagagaaaagtcaa
agtgatatactagaaaagcttgagaaatttggtttttgcgtaaatgagcatcgttcctta
acaagtagtttgaatggaatgctaaagttctataacgagatctatgattatcgttataac
ttggattatgatatcgatgggatagtctataaagtgaatgatttggtgctacaaagtcgt
ctgggaagtacacacaaagcgccacgctcagcgcttgcatataaattttctgcggtttat
gcaaagacaaagttaaataaaatatttatacaggtgggtagaacgggggttttaactcca
gttgcagatttagtaccagtcaatattggtggagtattagttagcagagcaagtctacat
aaccaagatgagataaaacgtaaagatataagagagggagatgttgtaacaattaaaagg
gctggggatgtaattcctcaaattgtcaaagtagatgaaggttctcgtcatacaaatatg
cctgaatttgtttttcctgacatatgtcctgaatgtggtagtaaagtgcagattgaagga
gttgcagtaagatgtcctaaagaatttaattgcaaggctcaaatagtagaaaaactaaaa
cattttgtgtcaaaagatgcatttgacattgttggccttggtgaaaaacaaataaagttt
ttttatgacctggaactaataagacaaattccagacatttttattttagaggaaagatta
aaagagttttccttaaaagagcatcatggttggggcgagaagtcaatagctaatctatta
agtgctataaaaagcagaagagtaatctctctagataggttcatattttctttgggtatc
agatttatcggccaagttgcagcagaattgctcgcaaattattatgtatcttatgataac
tggtataattcgatgtcatcaaatgatgttgagttggtaggtatagatggtataggagaa
aaagtagctgaatctttaaaatcgtttttttctcaggaacgtaacattaaaatgttaaat
gatcttactgcatatctgcaaattcttcccgtgggctccaactctaacgattcttttttg
aataacaaaattatagtgtttactggtaagctacgtgctatgagtagaggagaagcaaaa
gtaagagctaaagttttaggggcaaagatcagttcaagcctttctactaaaactgactat
ctaattgcaggagaagatccaggttcaaaatataaaaaagcaatggaattgggtgtggaa
attttagatgaagaacagtggaacaaattgtgctaa
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