Weissella sagaensis: AB9G37_05980
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Entry
AB9G37_05980 CDS
T11351
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wsa Weissella sagaensis
Pathway
wsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB9G37_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wsa03019
]
AB9G37_05980
03009 Ribosome biogenesis [BR:
wsa03009
]
AB9G37_05980
Enzymes [BR:
wsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB9G37_05980
Messenger RNA biogenesis [BR:
wsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB9G37_05980
Ribosome biogenesis [BR:
wsa03009
]
Prokaryotic type
rRNA helicases
AB9G37_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XEC90915
LinkDB
All DBs
Position
complement(1206732..1208279)
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AA seq
515 aa
AA seq
DB search
MKFSELGLTQDLLTAIEKHGYVEATPIQEKTIPLTMAGKDVIGQAQTGTGKTAAFGLPIL
EMIDNDNKDVQALVVSPTRELAIQTQEELFKLGRDKHVRVQAVFGGADIRRQINGLNHGA
HIVVGTPGRLIDHIRRGTINLSHVKTLVLDEADEMLNMGFLEDIESILKAVPDERQTLLF
SATMPAAIKRIGVQFMTNPEHIQIAAKELTTDLVDQYYVRVRDFEKFDVLTRILDVQQPQ
LAIMFGRTKRRVDELTRGLELRGFNAAGIHGDLTQQKRTQVLKQFKNGEIRILVATDVAA
RGLDVSGVDYVYNFDIPQDSESYVHRIGRTGRAGAHGTSVTFISNAEMDYLKDIEKLTKK
RMQPLKPYTHEEALAGRMSVAAASVDAIVKTTANVAGSELVDQLAEKYDARELAAALLGS
AANVEEMDAEFKLSHERPLPHKHGGNGGRRGGGNRGRRDGDRRHGNGGGYRGNRGQRERR
SYDRGSRTGSGDRSQRGHSGAPRRQSRNFVIKNND
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttttcagagttaggtcttacacaagaccttttgacggccattgagaagcatggc
tatgtagaagctacgccaattcaggaaaagacaattccgttgacgatggctggtaaagac
gttattggtcaagcccaaacaggaaccggtaagacagctgcatttggtttgccaatccta
gaaatgattgacaatgataataaagatgttcaagccttggttgtttcaccaacccgtgaa
ttagctatccaaacccaagaagaattattcaagttgggtcgtgataagcatgttcgtgta
caagccgttttcggtggtgctgatattcgtcgccaaattaatgggttaaaccatggtgcc
cacattgttgttggaacacctggtcgtttaattgaccatattcgtcgtggtacgattaac
ctatcacatgttaagacattggtattagatgaagccgatgaaatgttgaacatgggattc
ttagaagatattgaatcaatcttgaaggccgtccctgatgagcgtcaaacattgttgttc
tcagcaacgatgcctgcagctatcaagcgtattggtgttcaatttatgactaatcctgag
cacattcaaattgctgctaaggaattaacaacagacttagttgaccaatattacgtacgt
gtacgtgattttgaaaagttcgatgtactaacgcgtattttggatgtacaacaaccacaa
ctagctattatgttcggtcgtacaaagcgtcgtgttgatgaattgacacgtggtttggaa
ttacgtggctttaatgctgctggtattcatggtgacttgacacaacaaaagcgtacacaa
gttttgaaacaattcaagaatggtgaaattcgcattttggttgcaactgatgttgctgct
cgtggattagatgtttctggtgttgattacgtttataactttgatattccacaagattca
gagtcatatgttcaccgtattggtcgtacaggtcgtgccggtgctcatggaacttctgta
actttcatttcaaatgctgagatggattacttgaaggatattgaaaagctaactaagaaa
cgtatgcaaccattaaagccatacacacacgaagaagcacttgctggtcgtatgagtgtt
gcagctgcatctgttgatgcaattgttaagacgactgctaacgttgctggttcagaatta
gttgatcaattagctgaaaagtatgatgctcgtgaattagcagctgccttattaggttct
gccgctaatgttgaagagatggatgctgaatttaagttatcacacgaacgtcctttgcca
cacaagcatggtggtaatggtggccgtcgtggtggcggtaaccgtggtcgtcgcgatggt
gaccgtcgtcatggtaatggtggtggttaccgtggtaaccgtggacaacgtgagcgtcgt
tcatatgatcgtggttcacgtactggttcaggtgatcgttcacaacgtggacattcaggt
gcaccacgtcgtcaatcacgtaactttgtgattaagaataacgactaa
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