Wallemia mellicola: WALSEDRAFT_60137
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Entry
WALSEDRAFT_60137 CDS
T03142
Name
(RefSeq) DNA ligase/mRNA capping enzyme
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
wse
Wallemia mellicola
Pathway
wse03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
WALSEDRAFT_60137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_60137
Enzymes [BR:
wse01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
WALSEDRAFT_60137
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
WALSEDRAFT_60137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
18473764
NCBI-ProteinID:
XP_006957839
JGI:
Walse1_60137
UniProt:
I4YDJ0
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MDCNSNSYTKLTLHDTMAAWHWYMPKIYSKMADLDLSADAIDELPLDATPFQCIQLIQSR
PGVQLEIPSCIKGQSLRHALDVNQGCEQLMAETKYDGERVQIHIIDQDIIKIFSKSKVDS
TSDRAGIVPIIREALGLPSKSYPPGFPDGEFNDSLTSSEPTRGITSGIFEAEMVAFDRRK
NKIDEYYRIRELLQSCKGNNKLSNFEAMNSNSSLESVDENLNDCSKRHLAVVFFDILHLD
GRDLTDEPLSNRREILEEVVRKVPQFSMLSQVDKIDIRNSNKAMHSLQRIYASNIANCQE
GLVLKPSYGTYNCSRLRWVKIKRDYIPGLGDTADFVIIGARHDPQRGRELLVLPHVLTTF
TVALKAKQTDMRKLRKRSGINQWDVRDHYHALFEVSYGLVRSELEDLNLEAKCRAGESPS
LPYTYSFERGLKIPTILFQRPILFELTGASFTRKPRSKWYELRFPRITK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaatagcaactcgtacaccaaattgaccttacatgatacaatggccgcatgg
cattggtacatgccgaaaatatattccaaaatggctgacctggatttgtctgccgacgcc
atcgatgagctacctcttgacgctacgcctttccaatgcatccaattaatacagtcccgt
ccaggggtccaattagaaattccttcatgcatcaaaggacaatctctaagacatgcgctg
gacgtcaatcagggctgcgagcaattaatggccgaaacaaaatacgatggggaaagagtg
cagatacatatcatagatcaggatattatcaaaattttctctaagtcaaaagtagatagt
acatcggacagggcaggtattgttcccataataagagaggcactggggcttccttctaag
agctatcctccaggttttccagatggagaattcaatgattcgctcacctcctcagagccc
acacggggtattacctcaggaattttcgaagccgagatggttgctttcgataggcgcaaa
aacaaaatcgatgaatattacaggatcagggagctgttgcaatcatgcaagggcaacaac
aaattatccaattttgaagcaatgaattcaaacagcagtttagagagcgtcgacgagaat
ctaaatgattgttcgaaaagacatcttgctgtagtgtttttcgatattctccatcttgac
gggagggatctcacagacgagcctctttctaatcgcagggagatacttgaagaggtggtg
cgcaaagtacctcaatttagtatgctctcgcaagttgacaaaatagacatccgcaactca
aacaaggctatgcactcactccagcgaatatatgcatcaaacatcgcaaactgtcaggag
ggcctcgtattaaagccgagctatggtacctataactgttcacgattacgttgggtgaag
atcaaacgagattatatacctggattgggagacacagctgattttgtcattattggtgca
cgacatgacccacagcgcggtcgtgagctattggtcctcccgcatgtgttgactacattc
actgttgctctcaaagcgaagcaaacggatatgcgcaagctacgtaagaggagcggaatc
aatcaatgggatgttcgcgaccactatcatgcgttgtttgaggtcagctatggtctggta
cggtctgaactagaggacctcaacttggaagccaagtgcagggcgggagagagcccatcg
ctaccttatacatattcattcgagagaggcttaaagatacctacaatcctattccagcga
cctatcctatttgagctcacaggcgcatccttcacccgcaagcctagatcaaagtggtac
gagctgcgcttcccgagaataacaaaataa
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