Weeksella virosa: Weevi_1932
Help
Entry
Weevi_1932 CDS
T01441
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
wvi
Weeksella virosa
Pathway
wvi03030
DNA replication
wvi03410
Base excision repair
wvi03420
Nucleotide excision repair
wvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Weevi_1932
03410 Base excision repair
Weevi_1932
03420 Nucleotide excision repair
Weevi_1932
03430 Mismatch repair
Weevi_1932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wvi03032
]
Weevi_1932
03400 DNA repair and recombination proteins [BR:
wvi03400
]
Weevi_1932
Enzymes [BR:
wvi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Weevi_1932
DNA replication proteins [BR:
wvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Weevi_1932
DNA repair and recombination proteins [BR:
wvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Weevi_1932
NER (nucleotide excision repair)
GGR (global genome repair) factors
Weevi_1932
MMR (mismatch excision repair)
DNA ligase
Weevi_1932
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Weevi_1932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADX68616
UniProt:
F0P132
LinkDB
All DBs
Position
complement(2072364..2074355)
Genome browser
AA seq
663 aa
AA seq
DB search
MDTQQRILALREELHQHNYRYYVLDQPSISDFEFDLKLKELQKLEKEHPEFSDPNSPTVR
VGGSITKNFPTISHEYQMYSLDNSYSIEELKQWIARVYKNIENPTFVCELKYDGASISIL
YENGKLTQAVTRGDGTQGDDITANVKTITSLPLILRGSYPTKFYMRGEITIPIKTFDKIN
EQRKDEGLLLYANPRNTASGSLKLQDSAEVAKRGLQCFPYAFVGENLGFDEQWTMIEKAK
ELGFKIPETASLCSNLEEIIAYITKWESKRHQLPFEIDGIVIKVNSFAQQEELGYTSKSP
RWAVAYKFKAEAAETTLESITYQVGRTGAITPVANLHPVQLAGTIIRRASLHNEDIIKKL
DIRIGDQVYVEKGGEIIPKIVGVNTDVRPAGTEEIRYIENCPSCGTKLVRGEGEALHYCL
NEDGCPPQIIGRLEHFVSRKAMDIESIGSETAILLHEAGLVNNVADFYTLTKEMILPLER
MAEKSAQNIIDAIENSKQQSFERLLYGLGIRHVGNTVAKKLALHFGTMESLKKATYDELI
LVEDIGEKIAQSIIAYFDKEEHLELIDRLKTYGLSLELGKEQTPISDKLTGKTFLFTGSL
TKFTRAEAQKLVEEHGGKNLSAVSKNLDYLIAGEKAGSKLKKAEELKITVLTEGEFLELI
NNN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcaacagagaattcttgcattacgagaagaattacaccagcacaattatcga
tactatgtgttggatcagccgagtatttctgattttgagtttgatttgaaactaaaagaa
cttcaaaaactagaaaaagaacacccagaattttctgacccaaattctcctaccgttcga
gttggtggcagcattaccaaaaacttcccaaccatctcccatgagtatcaaatgtattcg
ctcgacaactcgtattctatagaagaactgaaacaatggattgctcgagtatacaaaaat
atagaaaatcccacctttgtttgtgaactaaaatatgatggtgcatcaataagtatctta
tacgagaacggaaaattgacacaagctgtaacccgtggtgatggcacacagggcgatgac
attaccgctaatgtaaaaacaatcacgtctttgccgcttattttgcgaggctcctatcct
acaaagttctatatgcgtggtgaaattaccataccgataaaaacctttgataaaataaat
gaacaacgcaaagatgaaggtttacttttatacgccaatccgaggaatacagcgtctggt
tcgctaaagttacaagacagtgccgaggttgctaaacgaggtttgcaatgctttccttat
gcatttgtaggtgaaaatttaggttttgatgaacaatggacaatgatcgaaaaagccaaa
gagcttggttttaaaattccagaaactgccagcctttgttccaatttagaagaaattata
gcttacataacaaaatgggaaagcaagcgtcatcaattgccgtttgaaattgatgggatt
gttataaaagtcaactcttttgcacaacaagaagaattgggctatacatcgaaatcaccc
cgatgggcagttgcctacaagtttaaagcagaagcagcagaaacaaccttagaaagcatt
acatatcaagtaggtagaacaggtgctatcacacccgtagccaatttgcatcccgtacaa
ttggccggaaccataataagaagagcttctttgcataatgaagatattatcaaaaaatta
gatattcggattggcgatcaggtatatgtagaaaaaggtggagaaattattccaaaaatt
gttggtgttaataccgatgttcgccctgccggaactgaagaaatacggtacatcgagaat
tgtccttcgtgcggaacgaaactggtgagaggcgaaggcgaagccttgcattactgtctg
aacgaggacggttgcccgccacaaataattggacgattggaacattttgtttctagaaaa
gcaatggatatcgaaagcattggtagtgaaacagcaatacttttacacgaagcaggtttg
gtgaataatgttgctgacttctataccttgaccaaagagatgattttacctctcgaacga
atggcagaaaagtctgcacaaaatattatcgatgcgattgagaactctaaacaacaatct
ttcgaacgattattgtatggcttaggaattcgacatgtgggcaatactgtagccaagaaa
ttagcattacatttcgggactatggaaagtctaaagaaagcaacgtatgatgagttgata
ttggtggaagatattggagaaaaaattgcacaatcgataattgcttacttcgataaagaa
gaacatctcgagttgattgatcgtttgaagacgtatggattatcactagaattaggtaaa
gaacaaacaccaatttctgataagttaacgggaaaaacatttctttttaccggaagtcta
acgaaatttactcgagcagaagcccaaaaattggtcgaagaacacggtggtaaaaacctt
tctgctgtgagtaaaaatctcgattatttaattgccggtgaaaaagcaggaagcaaacta
aaaaaagccgaagaactaaaaattacggtactcacagaaggtgaatttctcgaactcatt
aacaataattaa
DBGET
integrated database retrieval system
