Entry
Symbol
virD4
Name
KO
Organism
xac Xanthomonas citri pv. citri 306
Pathway
Brite
KEGG Orthology (KO) [BR:xac00001 ]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
XAC2623 (virD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:xac02044 ]
XAC2623 (virD4)
Enzymes [BR:xac01000 ]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.8 protein-secreting ATPase
XAC2623 (virD4)
Secretion system [BR:xac02044 ]
Type IV secretion system
Conjugal DNA-protein transfer (VirB/D) protein
XAC2623 (virD4)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
complement(3088230..3089903)
Genome browser
AA seq
557 aa AA seq DB search
MSKPKIIAIATLVAVLAGYCLSGYLTLLLLRLDTGLYGWDTYYRYFSALGLPQVAPYATK
IKIAGVLGFGLPVLVWAIAVVLIVKPKARALHGDARFAGAADLSKHGLFKPSGNGIVVGK
FNGKLVRLSGQQFVILAAPTRSGKGVGVVIPNLLEYQESVVVLDIKQENFDLTSGWRASQ
GHEVFLFNPFAEDRRTHRWNPLTYVSNDPAFRVSDLMSIAAMLYPDGSDDQKFWVSQARN
AFMAFALYLFENWDEELSLGFPGGAGAPTLGGIYRLSSGDGTDLKKYLKSLSERRFLSSN
AKSAFANLLSQADETFASIMGTLKEPLNAWINPVLDAATSADDFVLTDLRKKKMTIYIGI
QPNKLAESRLIINLLFSQIINLNTRELPKSNPELKYQCLLLMDEFTSIGKVDIIATAVAY
MAGYNIRLLPIIQSMAQLDATYGKDLSRTIITNHALQILYAPREQQDANDYSEMLGYTTI
KKKNVTRGRETTHSVSEERRALMLPQELKAMGNEKEVFLYEGIPHPVKCDKIRYYEDRHF
TARLLPKTEVKTLTIRM
NT seq
1674 nt NT seq +upstream nt +downstream nt
atgtccaaacccaaaatcatcgcaattgccacgctggtggcggttctagccggatattgc
ctgtccggctatctgaccctgctgttgctgcggctcgacaccggtctgtacgggtgggac
acctactaccgctatttcagcgcgcttgggttgccccaagtggcgccttacgcgaccaag
atcaagattgcgggcgtgcttggattcgggctgccggtgctggtctgggcgattgccgtt
gtgctcatcgtcaagcccaaggcgcgcgccctgcacggtgacgcgcgcttcgccggcgcc
gccgatctctccaagcacgggctgttcaagcccagcggaaacggcatcgtcgtcggcaag
ttcaacggcaagctggtgcgattgagcggccagcaattcgtgattcttgctgcaccgacg
cgctcgggtaagggcgtcggtgtcgtcatcccgaacctcttggagtatcaagagtcggtc
gtggtcctggacatcaagcaggagaacttcgacctgaccagtggctggcgtgccagccag
ggccacgaggtcttcctgttcaatccgttcgccgaagaccgtcgcacgcatcgctggaat
ccattgacctatgtgtcgaacgatcccgcatttcgcgtttcggatttgatgagcatcgca
gcgatgttgtacccggacggatccgacgaccagaagttctgggtgagccaggcgcgcaac
gccttcatggcgttcgcgttgtacctgttcgaaaactgggacgaggagctctcgctcggt
tttccgggtggggcaggagcacccaccttgggcggaatttatcgcctttcgtcgggtgac
ggcaccgatctcaagaaatatctgaagtcgctgtccgagcggcggttcctcagcagcaac
gccaagtcggcctttgccaacctgctgtcacaggcggatgagaccttcgcctcgatcatg
ggcaccttgaaggagccgctcaatgcgtggatcaatccggttctggacgctgcaaccagt
gcggacgacttcgtgctcacggaccttcgcaagaagaagatgaccatctacatcggcatc
cagcccaacaagctggccgaaagccgcctgatcatcaacctgctcttcagccagatcatc
aacctcaacacccgcgaactgcccaaatccaaccccgagctcaagtaccagtgcctgctg
ctgatggacgaattcacctcgatcggcaaggtggacatcatcgcgaccgcggtagcctac
atggccggctacaacatccgcctgctgcccatcatccaaagcatggcccagctggacgcg
acctacggcaaagatctgtcacgcaccatcatcaccaatcacgccctgcagatcctttac
gcaccacgcgaacagcaggacgccaacgactattccgagatgctgggatacaccaccatc
aagaagaagaacgtcaccagagggcgggagaccacccatagcgtgtcagaagaacgccgg
gcgctgatgttgccgcaggagctcaaggcgatgggcaatgaaaaggaagtgttcttgtac
gagggaatcccgcacccggtgaagtgcgacaagatccgctactacgaggatcgccacttc
actgcgcgcttgttgccgaaaaccgaagtgaagacgcttaccatcagaatgtga