Xanthomonas sp. CFBP 8443: NUG20_14330
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Entry
NUG20_14330 CDS
T11514
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf01501
beta-Lactam resistance
xaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NUG20_14330
01503 Cationic antimicrobial peptide (CAMP) resistance
NUG20_14330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xaf03036
]
NUG20_14330
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xaf02000
]
NUG20_14330
01504 Antimicrobial resistance genes [BR:
xaf01504
]
NUG20_14330
Chromosome and associated proteins [BR:
xaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NUG20_14330
Transporters [BR:
xaf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NUG20_14330
Antimicrobial resistance genes [BR:
xaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NUG20_14330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
HH_AAEA_pHBA
YknX_C
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
UYC19352
LinkDB
All DBs
Position
complement(3425167..3426372)
Genome browser
AA seq
401 aa
AA seq
DB search
MRPVLSSRLSPALAVAATLLLSACGSPPGGPPPEEGTPQMGVVTVATRPVALTTELPGRT
LPYLIADVRPQVNGIIQARKFREGGEVKAGETLYQIDPASYRATYDSYVAALGRAQATLR
TARLKAERYRELVKVSAISRQDSDDADAALGQAEADVAAAKANVESARINLAYARVDAPI
SGRIGKSSVTAGALVTASQATALATIQQLDPIYVDVTQPSASLLRLRQALASGELEKADA
TAAKVSLLLEDGSPYPLQGRLEFSDVTVDQNTGSITLRAVFPNPNADLLPGMYVRAVLQE
GMKDQAILVPQQAVSRNGAGKPTAYVVGRDHTLQLRVLETDRAVGDQWLVRSGLKPGEQL
VVEGQSRARPGATVKTVPWQAKAAPAAAPAAAAAPAPRATN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcctgtcctgtcctctcgtctctcgccggccctggccgtggcggccaccctgctg
ttgagcgcctgcggttcgcccccgggcggcccgccgccggaggagggcacgccgcagatg
ggcgtcgtcaccgtcgccacgcgcccggtcgcgctgaccaccgaattgccggggcgcacg
ctgccgtacctgatcgccgatgtgcggccgcaggtgaacggcatcatccaggcgcgcaag
ttccgcgagggcggcgaggtcaaggccggcgagacgctgtaccagatcgacccggccagc
tatcgcgccacctacgacagctacgtggccgcgctcggcagggcgcaggccacgctgcgc
accgcgcggctgaaggccgagcgctaccgcgaactggtgaaggtgtcggcgatcagccgg
caggacagcgacgatgccgatgccgcgctcgggcaggccgaggcggatgtcgccgcggcc
aaggccaacgtggaaagcgcacgcatcaacctggcctatgcgcgggtggatgcgccgatt
tccgggcgcatcggcaagtccagcgtcaccgccggcgcgctggtcaccgccagccaggcg
acggcgctggccacgatccagcaactggatccgatctacgtcgacgtcacccagcccagc
gcctcgctgctgcggctcaggcaggcactggccagcggcgaactggagaaggccgacgcc
accgcggccaaggtgtcgctgctgctggaggacggcagtccgtacccgttgcaggggcgg
ctggagttctccgacgtcaccgtcgaccagaacaccggctcgatcaccttgcgcgcggtg
ttccccaacccgaacgcggacctgctgccgggcatgtacgtgcgcgcggtgctgcaggag
gggatgaaggaccaggcgatcctggtgccgcagcaggcggtgtcgcgcaacggcgcgggc
aagccgaccgcgtacgtggtcggccgcgaccacacgctgcagctgcgcgtgctggagacc
gaccgcgcggtcggcgaccaatggctggtgcgcagcgggctcaagcccggcgagcagctg
gtggtcgagggccagtcgcgggcccggcccggggcgacggtcaagaccgtgccgtggcag
gcgaaggccgcccccgccgcggcgcctgccgctgccgccgcgcccgcgccgcgcgcgacc
aactga
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