Xanthomonas sp. CFBP 8443: NUG20_16665
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Entry
NUG20_16665 CDS
T11514
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xaf Xanthomonas sp. CFBP 8443
Pathway
xaf01501
beta-Lactam resistance
xaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NUG20_16665
01503 Cationic antimicrobial peptide (CAMP) resistance
NUG20_16665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xaf03036
]
NUG20_16665
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xaf02000
]
NUG20_16665
01504 Antimicrobial resistance genes [BR:
xaf01504
]
NUG20_16665
Chromosome and associated proteins [BR:
xaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NUG20_16665
Transporters [BR:
xaf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NUG20_16665
Antimicrobial resistance genes [BR:
xaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NUG20_16665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
HH_MFP_RND
Biotin_lipoyl
BSH_RND
CzcB_C
RND-MFP_C
Beta-barrel_RND_2
BSH_CzcB
BSH_Fcp1
NQRA_N
HH_YBHG
BSH_YknX
YknX_C
DUF7194
C19orf12
Motif
Other DBs
NCBI-ProteinID:
UYC19786
LinkDB
All DBs
Position
complement(3984341..3985423)
Genome browser
AA seq
360 aa
AA seq
DB search
MKPFALSIALAASLSLAACRHESPSAVPPPLPALQTDAVAFADSSARAWDGVVAAVDHAD
LSAQTDGRVREVTVDVDDRVAAGQVLLRLSAVEQRAGVDSAQAQLRSATASADEAEASYR
RYAALAGAQYVSRAQLDQVRATRDAAVAARQSASAQLAQARQPADYTVIRAPFAGVVSAR
QVQPGEAVATGQLLLSLYAPGAQRIEVQVPQSDAAAIRAAPHAQVRLDDGRALAVQRVRV
FPTADPNSHSVTVRVPLPALLPAPAPGTTAKVAFAVPTDGTDAATTTLWMPRAALLQRGE
LSAAYVLAAGALSLRQLRVGRQEPQRVEVLAGLRVGERVARDPVAAGQALAAQRRALAER
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgtttgccctctcgatcgcgctggccgcgagtctgtcgctcgcggcgtgccgc
cacgaatccccctcggcggtgccgccgccgctgcctgcgctgcagaccgacgcggtggcg
ttcgccgattcctccgcgcgtgcctgggacggcgtggtcgctgcggtggaccatgccgac
ctgtcagcgcagaccgacgggcgcgtgcgtgaggtcactgtggacgtcgacgaccgtgtc
gccgccggccaggtgctgctgcggctcagcgccgtggagcagcgcgccggcgtggacagc
gcgcaggcgcagctgcgttccgccacggccagtgccgacgaagccgaggccagctatcgc
cgctacgccgcgctggccggcgcgcagtacgtgtccagggcgcagctggatcaggtccgg
gccacccgcgatgccgcggtcgcggcgcgccagtccgcctccgcgcagctggcgcaggcg
cggcagccggccgactacacggtgatccgtgcaccgtttgccggcgtggtcagtgcgcgg
caggtgcagcccggcgaagcggtggcgacgggccagctgctgctgtcgttgtacgcgcct
ggggcgcagcgcatcgaggtgcaggtgccgcagtccgatgccgcggcgatccgcgccgcg
ccgcacgcgcaggtgcggctggacgacggccgcgcgctggcggtgcaacgggtgcgggtg
tttcccaccgccgatccgaacagccacagcgtgacggtgcgcgtgccgctgcccgcgctg
ctgccggcaccggcaccgggcacgaccgccaaggtcgcgttcgccgtaccgaccgatggc
accgacgcggccacgaccacgctgtggatgccgcgtgcggcgttgctgcagcgtggcgaa
ctcagcgcggcctatgtgctggccgccggcgcgctgagcctgcgccagctgcgcgtgggc
cggcaggagccgcagcgggtcgaagtgctggcgggattacgcgtcggcgaacgcgtggcg
cgcgatccggtcgccgccgggcaggcgctggccgcgcagcggcgcgcgctggcggagcgc
tga
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