Xanthomonas sp. SS: HEP74_03414
Help
Entry
HEP74_03414 CDS
T09534
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas00300
Lysine biosynthesis
xas00550
Peptidoglycan biosynthesis
xas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEP74_03414
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEP74_03414
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xas01011
]
HEP74_03414
Enzymes [BR:
xas01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HEP74_03414
Peptidoglycan biosynthesis and degradation proteins [BR:
xas01011
]
Precursor biosynthesis
Amino acid ligase
HEP74_03414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
QNH18242
LinkDB
All DBs
Position
complement(4117046..4118539)
Genome browser
AA seq
497 aa
AA seq
DB search
MSRALPLSKLLPDVALARDVQVSGLVMDSRAVRAGDAFVAIAGFGAHGLGFVAQAQANGA
AAILFEPPAPVELPAPVDAIAVPGLRARMGAMADQFHGHPSQTMTMVGVTGTNGKTSTVQ
LLAQAWQCLGTRSGSIGTLGVGLYGDVVPTGFTTPLVLQTHALLAQLRDAGAQAVAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGDMAGYGAAKARLFATPGLKAAVVNLDDAF
GRDLLATLDPALRRIGVSSRGQAGATLRAEALRLDARGIGFDLLIDGARHPVQSLLLGRF
NVDNLLAVAGALYALDVAPARIAATLSQLQPIRGRMNRLGGSDAQPLLVIDYAHTPDALE
QALDSLRGHAHGRLLCVFGCGGERDTGKRPQMAAIAQRLADAVIVTDDNPRGEDGDRIVA
DILAGFTDLQAVRVQRDRAQAIALAVAEAGPDDIVLIAGKGHEPYQEIAGIQHPFDDIEV
AAQALQARAARTVEHAR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtgcgctgccgctgtcgaaattgctgccggacgtggcgctggcgcgcgacgtg
caggtgtccgggctggtcatggacagccgtgcggtgcgcgccggcgatgcgttcgtggcg
atcgccgggttcggcgcgcacgggctgggcttcgtcgcgcaggcgcaggccaatggcgcc
gcggcgatcttgttcgaaccgccggcgccggtcgagttgccggccccggtcgacgcgatc
gcggtgccgggcctgcgtgcgcgcatgggcgcgatggccgaccagttccacggccatccg
tcgcagacgatgaccatggtcggagttaccggcaccaacggcaagacctccaccgtgcag
ctgctggcgcaggcctggcagtgcctgggcacgcgcagcggcagcatcggcacgctcggc
gtcggcctgtacggcgacgtggtgccgaccggtttcaccaccccgctggtgctgcagacg
cacgcgctgctggcgcagctgcgcgacgccggcgcgcaggcggtggcgatggaagtgagc
tcgcacgcgctggaccagggccgcgtggatgcggtgcacttcgacgtggcggtgttcacc
aatctcacccgcgaccatctggactaccacggcgacatggccggctacggcgcggccaag
gcgcgcctgttcgccacgccggggctgaaggccgcggtcgtcaatctcgacgacgcgttc
ggccgtgatttgctggcgacgctggacccggcactgcgccgcatcggcgtcagttcgcgc
ggccaggccggcgccacgctgcgcgccgaggcgctgcgcctggacgcgcgcggcatcggt
ttcgacctgctgatcgacggtgcgcggcatccagtgcagtcgttgctgctcggccgcttc
aacgtggacaacctgctggccgtggccggcgcgctgtacgcgctggacgtggcgccggcg
cgtatcgccgcgacgctgtcgcagctgcagccgatccgcgggcgcatgaaccgcctcggc
ggcagcgacgcgcagccgctgctggtgatcgattacgcgcacaccccggacgcgctggag
caggcgctggacagcctgcgcggccacgcccacggccgcctgctgtgcgtgttcggctgc
ggcggcgagcgcgacaccggcaagcgcccgcagatggcggcgatcgcgcagcgcctggcc
gatgcggtgatcgtcaccgacgacaatccgcgcggcgaggacggcgatcgcatcgtcgcc
gacatcctggccgggttcaccgacctgcaggcggtgcgcgtgcagcgcgaccgcgcgcag
gccatcgccctggccgtggccgaagccggccccgacgacatcgtgctgatcgccggcaag
ggccacgagccgtaccaggaaatcgccggtatccagcatccgttcgacgacatcgaggtc
gccgcgcaggcgctgcaggcgcgcgccgcacggaccgtggagcacgcccgatga
DBGET
integrated database retrieval system
